Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHRNB2P17787 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB2P17787 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CHRNB2P17787 AC018529.2-202ENST00000611482 3087 ntBASIC16.29■□□□□ 0.2
CHRNB2P17787 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHRNB2P17787 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNB2P17787 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNB2P17787 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNB2P17787 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHRNB2P17787 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNB2P17787 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNB2P17787 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.29■□□□□ 0.2
CHRNB2P17787 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNB2P17787 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.29■□□□□ 0.2
CHRNB2P17787 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNB2P17787 BRI3BPP1-201ENST00000594224 787 ntBASIC16.29■□□□□ 0.2
CHRNB2P17787 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNB2P17787 AL138799.1-201ENST00000448213 1675 ntBASIC16.29■□□□□ 0.2
CHRNB2P17787 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNB2P17787 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB2P17787 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB2P17787 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CHRNB2P17787 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB2P17787 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB2P17787 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB2P17787 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB2P17787 AC140479.7-201ENST00000636301 2332 ntBASIC16.29■□□□□ 0.2
CHRNB2P17787 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB2P17787 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHRNB2P17787 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB2P17787 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHRNB2P17787 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB2P17787 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB2P17787 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB2P17787 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB2P17787 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNB2P17787 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNB2P17787 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNB2P17787 MTHFR-210ENST00000641407 2387 ntBASIC16.28■□□□□ 0.2
CHRNB2P17787 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNB2P17787 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNB2P17787 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CHRNB2P17787 SPTLC1P1-201ENST00000447199 261 ntBASIC16.28■□□□□ 0.2
CHRNB2P17787 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNB2P17787 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNB2P17787 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.28■□□□□ 0.2
CHRNB2P17787 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.28■□□□□ 0.2
CHRNB2P17787 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.28■□□□□ 0.2
CHRNB2P17787 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.28■□□□□ 0.2
CHRNB2P17787 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNB2P17787 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNB2P17787 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNB2P17787 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNB2P17787 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB2P17787 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHRNB2P17787 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNB2P17787 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CHRNB2P17787 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CHRNB2P17787 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNB2P17787 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CHRNB2P17787 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNB2P17787 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CHRNB2P17787 AC007686.3-201ENST00000619017 3487 ntBASIC16.27■□□□□ 0.2
CHRNB2P17787 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNB2P17787 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNB2P17787 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNB2P17787 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CHRNB2P17787 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.27■□□□□ 0.2
CHRNB2P17787 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNB2P17787 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNB2P17787 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNB2P17787 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNB2P17787 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNB2P17787 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CHRNB2P17787 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CHRNB2P17787 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNB2P17787 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.27■□□□□ 0.2
CHRNB2P17787 MIR661-201ENST00000384842 89 ntBASIC16.27■□□□□ 0.2
CHRNB2P17787 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.27■□□□□ 0.2
CHRNB2P17787 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.27■□□□□ 0.2
CHRNB2P17787 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.27■□□□□ 0.2
CHRNB2P17787 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms