Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
SCG2P13521 AL360270.3-201ENST00000609118 1348 ntBASIC17.68■□□□□ 0.42
SCG2P13521 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCG2P13521 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.67■□□□□ 0.42
SCG2P13521 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCG2P13521 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCG2P13521 DBET-201ENST00000630918 3363 ntBASIC17.67■□□□□ 0.42
SCG2P13521 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCG2P13521 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.67■□□□□ 0.42
SCG2P13521 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCG2P13521 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
SCG2P13521 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
SCG2P13521 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 INE1-201ENST00000456273 945 ntBASIC17.67■□□□□ 0.42
SCG2P13521 AC011495.1-201ENST00000498085 584 ntBASIC17.67■□□□□ 0.42
SCG2P13521 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.67■□□□□ 0.42
SCG2P13521 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.67■□□□□ 0.42
SCG2P13521 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SCG2P13521 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SCG2P13521 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.67■□□□□ 0.42
SCG2P13521 AP001063.1-201ENST00000568332 529 ntBASIC17.67■□□□□ 0.42
SCG2P13521 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCG2P13521 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.67■□□□□ 0.42
SCG2P13521 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SCG2P13521 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.67■□□□□ 0.42
SCG2P13521 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SCG2P13521 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.67■□□□□ 0.42
SCG2P13521 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCG2P13521 ZBED1P1-201ENST00000502364 1930 ntBASIC17.66■□□□□ 0.42
SCG2P13521 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SCG2P13521 AL157414.3-201ENST00000624276 1954 ntBASIC17.66■□□□□ 0.42
SCG2P13521 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
SCG2P13521 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 RNU1-114P-201ENST00000365297 166 ntBASIC17.66■□□□□ 0.42
SCG2P13521 ACKR1-201ENST00000368121 1240 ntBASIC17.66■□□□□ 0.42
SCG2P13521 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.66■□□□□ 0.42
SCG2P13521 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SCG2P13521 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.66■□□□□ 0.42
SCG2P13521 HLA-K-203ENST00000430151 1046 ntBASIC17.66■□□□□ 0.42
SCG2P13521 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.66■□□□□ 0.42
SCG2P13521 U91328.1-201ENST00000437528 223 ntBASIC17.66■□□□□ 0.42
SCG2P13521 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.66■□□□□ 0.42
SCG2P13521 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SCG2P13521 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SCG2P13521 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SCG2P13521 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.66■□□□□ 0.42
SCG2P13521 AC010319.3-201ENST00000597028 470 ntBASIC17.66■□□□□ 0.42
SCG2P13521 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.66■□□□□ 0.42
SCG2P13521 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SCG2P13521 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.66■□□□□ 0.42
SCG2P13521 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.66■□□□□ 0.42
SCG2P13521 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SCG2P13521 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.66■□□□□ 0.42
SCG2P13521 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCG2P13521 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SCG2P13521 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.65■□□□□ 0.42
SCG2P13521 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms