Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT3P12035 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT3P12035 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT3P12035 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
KRT3P12035 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT3P12035 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 SPDYE19P-201ENST00000338590 713 ntBASIC16.25■□□□□ 0.19
KRT3P12035 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT3P12035 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT3P12035 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
KRT3P12035 AC023310.3-201ENST00000557027 670 ntBASIC16.25■□□□□ 0.19
KRT3P12035 AC100756.1-201ENST00000562736 682 ntBASIC16.25■□□□□ 0.19
KRT3P12035 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT3P12035 AC138749.3-201ENST00000567691 622 ntBASIC16.25■□□□□ 0.19
KRT3P12035 AC116165.1-201ENST00000611806 668 ntBASIC16.25■□□□□ 0.19
KRT3P12035 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT3P12035 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
KRT3P12035 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
KRT3P12035 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
KRT3P12035 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT3P12035 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
KRT3P12035 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT3P12035 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT3P12035 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT3P12035 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT3P12035 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT3P12035 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
KRT3P12035 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
KRT3P12035 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT3P12035 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT3P12035 AL161772.1-201ENST00000610494 4412 ntBASIC16.24■□□□□ 0.19
KRT3P12035 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
KRT3P12035 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT3P12035 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
KRT3P12035 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
KRT3P12035 ZBED1P1-201ENST00000502364 1930 ntBASIC16.24■□□□□ 0.19
KRT3P12035 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT3P12035 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
KRT3P12035 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT3P12035 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.24■□□□□ 0.19
KRT3P12035 UGT1A2P-201ENST00000454886 866 ntBASIC16.24■□□□□ 0.19
KRT3P12035 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT3P12035 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT3P12035 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.24■□□□□ 0.19
KRT3P12035 AC036164.1-201ENST00000570544 333 ntBASIC16.24■□□□□ 0.19
KRT3P12035 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT3P12035 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT3P12035 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT3P12035 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT3P12035 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
KRT3P12035 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
KRT3P12035 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
KRT3P12035 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT3P12035 AC023824.1-201ENST00000562945 2975 ntBASIC16.23■□□□□ 0.19
KRT3P12035 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT3P12035 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT3P12035 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT3P12035 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT3P12035 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT3P12035 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT3P12035 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT3P12035 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
KRT3P12035 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT3P12035 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT3P12035 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
KRT3P12035 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms