Protein–RNA interactions for Protein: P11229

CHRM1, Muscarinic acetylcholine receptor M1, humanhuman

Predicted RBP Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM1P11229 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.44■□□□□ 0.22
CHRM1P11229 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CHRM1P11229 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CHRM1P11229 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.44■□□□□ 0.22
CHRM1P11229 FAM204CP-201ENST00000424489 642 ntBASIC16.44■□□□□ 0.22
CHRM1P11229 HSFY7P-201ENST00000432672 318 ntBASIC16.44■□□□□ 0.22
CHRM1P11229 HSFY8P-201ENST00000437934 318 ntBASIC16.44■□□□□ 0.22
CHRM1P11229 HSFY5P-201ENST00000453726 309 ntBASIC16.44■□□□□ 0.22
CHRM1P11229 AC009245.1-201ENST00000456481 862 ntBASIC16.44■□□□□ 0.22
CHRM1P11229 SERBP1P3-201ENST00000459980 809 ntBASIC16.44■□□□□ 0.22
CHRM1P11229 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 RN7SKP157-201ENST00000516174 282 ntBASIC16.44■□□□□ 0.22
CHRM1P11229 AC026407.1-201ENST00000518369 204 ntBASIC16.44■□□□□ 0.22
CHRM1P11229 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC16.44■□□□□ 0.22
CHRM1P11229 AC012181.2-201ENST00000570210 699 ntBASIC16.44■□□□□ 0.22
CHRM1P11229 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.44■□□□□ 0.22
CHRM1P11229 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.44■□□□□ 0.22
CHRM1P11229 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC16.44■□□□□ 0.22
CHRM1P11229 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC16.44■□□□□ 0.22
CHRM1P11229 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC16.44■□□□□ 0.22
CHRM1P11229 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 ME2P1-201ENST00000426028 1970 ntBASIC16.44■□□□□ 0.22
CHRM1P11229 CYP2T1P-202ENST00000641596 2535 ntBASIC16.44■□□□□ 0.22
CHRM1P11229 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRM1P11229 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRM1P11229 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRM1P11229 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.43■□□□□ 0.22
CHRM1P11229 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRM1P11229 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRM1P11229 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHRM1P11229 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRM1P11229 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC16.43■□□□□ 0.22
CHRM1P11229 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRM1P11229 AC092964.1-201ENST00000623304 1399 ntBASIC16.43■□□□□ 0.22
CHRM1P11229 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRM1P11229 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CHRM1P11229 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.43■□□□□ 0.22
CHRM1P11229 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
CHRM1P11229 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.43■□□□□ 0.22
CHRM1P11229 GCNT6-201ENST00000379591 934 ntBASIC16.43■□□□□ 0.22
CHRM1P11229 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
CHRM1P11229 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
CHRM1P11229 AC098850.1-201ENST00000419919 790 ntBASIC16.43■□□□□ 0.22
CHRM1P11229 NUCKS1P1-201ENST00000452067 703 ntBASIC16.43■□□□□ 0.22
CHRM1P11229 RPL23AP68-201ENST00000480924 445 ntBASIC16.43■□□□□ 0.22
CHRM1P11229 AC016550.3-201ENST00000515706 767 ntBASIC16.43■□□□□ 0.22
CHRM1P11229 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRM1P11229 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.43■□□□□ 0.22
CHRM1P11229 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRM1P11229 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CHRM1P11229 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHRM1P11229 AC023310.3-201ENST00000557027 670 ntBASIC16.43■□□□□ 0.22
CHRM1P11229 AC100756.1-201ENST00000562736 682 ntBASIC16.43■□□□□ 0.22
CHRM1P11229 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.43■□□□□ 0.22
CHRM1P11229 AC138749.3-201ENST00000567691 622 ntBASIC16.43■□□□□ 0.22
CHRM1P11229 AL359881.2-201ENST00000602973 570 ntBASIC16.43■□□□□ 0.22
CHRM1P11229 AC099568.2-201ENST00000609194 695 ntBASIC16.43■□□□□ 0.22
CHRM1P11229 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.43■□□□□ 0.22
CHRM1P11229 AC116165.1-201ENST00000611806 668 ntBASIC16.43■□□□□ 0.22
CHRM1P11229 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CHRM1P11229 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.43■□□□□ 0.22
CHRM1P11229 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHRM1P11229 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms