Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CD28P10747 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.07□□□□□ -0.48
CD28P10747 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.07□□□□□ -0.48
CD28P10747 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CD28P10747 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CD28P10747 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.07□□□□□ -0.48
CD28P10747 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
CD28P10747 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.07□□□□□ -0.48
CD28P10747 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 YBX1P6-201ENST00000442962 1002 ntBASIC12.07□□□□□ -0.48
CD28P10747 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.07□□□□□ -0.48
CD28P10747 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.07□□□□□ -0.48
CD28P10747 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.07□□□□□ -0.48
CD28P10747 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.07□□□□□ -0.48
CD28P10747 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.07□□□□□ -0.48
CD28P10747 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.07□□□□□ -0.48
CD28P10747 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.07□□□□□ -0.48
CD28P10747 AC010328.2-201ENST00000597698 1111 ntBASIC12.07□□□□□ -0.48
CD28P10747 RHOXF1P1-202ENST00000635473 501 ntBASIC12.07□□□□□ -0.48
CD28P10747 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.07□□□□□ -0.48
CD28P10747 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CD28P10747 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.07□□□□□ -0.48
CD28P10747 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.07□□□□□ -0.48
CD28P10747 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.07□□□□□ -0.48
CD28P10747 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 TUBB1P2-201ENST00000422712 1306 ntBASIC12.07□□□□□ -0.48
CD28P10747 TUBB1P1-201ENST00000503144 1300 ntBASIC12.07□□□□□ -0.48
CD28P10747 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CD28P10747 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD28P10747 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CD28P10747 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.06□□□□□ -0.48
CD28P10747 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
CD28P10747 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.06□□□□□ -0.48
CD28P10747 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CD28P10747 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.06□□□□□ -0.48
CD28P10747 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.06□□□□□ -0.48
CD28P10747 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.06□□□□□ -0.48
CD28P10747 AC069224.1-201ENST00000566372 1715 ntBASIC12.06□□□□□ -0.48
CD28P10747 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 MTHFR-217ENST00000641820 1569 ntBASIC12.06□□□□□ -0.48
CD28P10747 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.06□□□□□ -0.48
CD28P10747 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CD28P10747 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CD28P10747 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 KRT18P25-201ENST00000508931 1278 ntBASIC12.06□□□□□ -0.48
CD28P10747 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CD28P10747 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.06□□□□□ -0.48
CD28P10747 AC079316.1-201ENST00000548397 411 ntBASIC12.06□□□□□ -0.48
CD28P10747 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.06□□□□□ -0.48
CD28P10747 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.06□□□□□ -0.48
CD28P10747 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.06□□□□□ -0.48
CD28P10747 GNRHR2-203ENST00000581100 1187 ntBASIC12.06□□□□□ -0.48
CD28P10747 AC009542.2-202ENST00000619004 1067 ntBASIC12.06□□□□□ -0.48
CD28P10747 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.06□□□□□ -0.48
CD28P10747 MYO15B-237ENST00000642007 4893 ntBASIC12.06□□□□□ -0.48
CD28P10747 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CD28P10747 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD28P10747 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms