Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.54■□□□□ 0.08
RETP07949 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.54■□□□□ 0.08
RETP07949 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.54■□□□□ 0.08
RETP07949 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RETP07949 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
RETP07949 AC069224.1-201ENST00000566372 1715 ntBASIC15.54■□□□□ 0.08
RETP07949 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
RETP07949 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RETP07949 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RETP07949 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.53■□□□□ 0.08
RETP07949 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RETP07949 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.53■□□□□ 0.08
RETP07949 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RETP07949 MIR648-201ENST00000385046 94 ntBASIC15.53■□□□□ 0.08
RETP07949 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.53■□□□□ 0.08
RETP07949 AC104457.1-201ENST00000401024 814 ntBASIC15.53■□□□□ 0.08
RETP07949 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.53■□□□□ 0.08
RETP07949 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.53■□□□□ 0.08
RETP07949 POM121L10P-201ENST00000436994 1285 ntBASIC15.53■□□□□ 0.08
RETP07949 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.53■□□□□ 0.08
RETP07949 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.53■□□□□ 0.08
RETP07949 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.53■□□□□ 0.08
RETP07949 KRT18P25-201ENST00000508931 1278 ntBASIC15.53■□□□□ 0.08
RETP07949 AC026410.3-201ENST00000514280 936 ntBASIC15.53■□□□□ 0.08
RETP07949 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.53■□□□□ 0.08
RETP07949 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.53■□□□□ 0.08
RETP07949 AC000095.1-201ENST00000603208 874 ntBASIC15.53■□□□□ 0.08
RETP07949 AL096828.3-201ENST00000615354 462 ntBASIC15.53■□□□□ 0.08
RETP07949 AC091812.3-201ENST00000621362 345 ntBASIC15.53■□□□□ 0.08
RETP07949 CU633904.3-201ENST00000624042 1029 ntBASIC15.53■□□□□ 0.08
RETP07949 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.53■□□□□ 0.08
RETP07949 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RETP07949 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RETP07949 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.53■□□□□ 0.08
RETP07949 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.53■□□□□ 0.08
RETP07949 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.53■□□□□ 0.08
RETP07949 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RETP07949 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.53■□□□□ 0.08
RETP07949 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.53■□□□□ 0.08
RETP07949 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RETP07949 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RETP07949 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RETP07949 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RETP07949 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RETP07949 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RETP07949 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RETP07949 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.52■□□□□ 0.08
RETP07949 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RETP07949 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.52■□□□□ 0.08
RETP07949 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RETP07949 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RETP07949 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RETP07949 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RETP07949 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RETP07949 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RETP07949 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RETP07949 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RETP07949 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RETP07949 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RETP07949 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RETP07949 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RETP07949 MIR1202-201ENST00000408529 83 ntBASIC15.52■□□□□ 0.08
RETP07949 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.52■□□□□ 0.08
RETP07949 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.52■□□□□ 0.08
RETP07949 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.52■□□□□ 0.08
RETP07949 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.52■□□□□ 0.08
RETP07949 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.52■□□□□ 0.08
RETP07949 MIR5572-201ENST00000583188 137 ntBASIC15.52■□□□□ 0.08
RETP07949 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.52■□□□□ 0.08
RETP07949 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.52■□□□□ 0.08
RETP07949 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.52■□□□□ 0.08
RETP07949 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms