Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.78■□□□□ 0.28
VTNP04004 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VTNP04004 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.78■□□□□ 0.28
VTNP04004 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.78■□□□□ 0.28
VTNP04004 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.78■□□□□ 0.28
VTNP04004 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.78■□□□□ 0.28
VTNP04004 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VTNP04004 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VTNP04004 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VTNP04004 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.77■□□□□ 0.28
VTNP04004 KRT8P44-201ENST00000441609 1350 ntBASIC16.77■□□□□ 0.28
VTNP04004 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VTNP04004 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VTNP04004 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.77■□□□□ 0.28
VTNP04004 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.77■□□□□ 0.28
VTNP04004 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VTNP04004 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VTNP04004 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VTNP04004 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VTNP04004 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
VTNP04004 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VTNP04004 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VTNP04004 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VTNP04004 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VTNP04004 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.77■□□□□ 0.28
VTNP04004 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
VTNP04004 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
VTNP04004 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
VTNP04004 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
VTNP04004 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.77■□□□□ 0.28
VTNP04004 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VTNP04004 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VTNP04004 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VTNP04004 AC245100.3-201ENST00000441281 285 ntBASIC16.77■□□□□ 0.28
VTNP04004 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.77■□□□□ 0.28
VTNP04004 HOMER2P2-201ENST00000451621 847 ntBASIC16.77■□□□□ 0.28
VTNP04004 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.77■□□□□ 0.28
VTNP04004 AC243960.2-201ENST00000600996 747 ntBASIC16.77■□□□□ 0.28
VTNP04004 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
VTNP04004 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VTNP04004 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.77■□□□□ 0.28
VTNP04004 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
VTNP04004 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
VTNP04004 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VTNP04004 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VTNP04004 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VTNP04004 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.76■□□□□ 0.27
VTNP04004 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
VTNP04004 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VTNP04004 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.76■□□□□ 0.27
VTNP04004 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VTNP04004 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VTNP04004 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 POM121L8P-201ENST00000417732 1281 ntBASIC16.76■□□□□ 0.27
VTNP04004 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.76■□□□□ 0.27
VTNP04004 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.76■□□□□ 0.27
VTNP04004 POM121L9P-203ENST00000441984 1285 ntBASIC16.76■□□□□ 0.27
VTNP04004 CNN2P10-201ENST00000443067 918 ntBASIC16.76■□□□□ 0.27
VTNP04004 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VTNP04004 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.76■□□□□ 0.27
VTNP04004 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.76■□□□□ 0.27
VTNP04004 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.76■□□□□ 0.27
VTNP04004 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.76■□□□□ 0.27
VTNP04004 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.76■□□□□ 0.27
VTNP04004 AC004466.1-201ENST00000599515 1080 ntBASIC16.76■□□□□ 0.27
VTNP04004 AL118558.3-201ENST00000607414 1079 ntBASIC16.76■□□□□ 0.27
VTNP04004 AC244093.1-201ENST00000610837 814 ntBASIC16.76■□□□□ 0.27
VTNP04004 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.76■□□□□ 0.27
VTNP04004 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms