Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DRAP01903 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DRAP01903 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 AL158070.2-201ENST00000623713 1621 ntBASIC16.52■□□□□ 0.24
HLA-DRAP01903 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DRAP01903 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DRAP01903 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DRAP01903 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DRAP01903 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DRAP01903 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DRAP01903 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DRAP01903 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DRAP01903 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DRAP01903 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 BX539320.1-201ENST00000623759 877 ntBASIC16.52■□□□□ 0.24
HLA-DRAP01903 AC005252.2-201ENST00000624630 1141 ntBASIC16.52■□□□□ 0.24
HLA-DRAP01903 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HLA-DRAP01903 AC067930.6-201ENST00000623257 4947 ntBASIC16.52■□□□□ 0.24
HLA-DRAP01903 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DRAP01903 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DRAP01903 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DRAP01903 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DRAP01903 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HLA-DRAP01903 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DRAP01903 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DRAP01903 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DRAP01903 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DRAP01903 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DRAP01903 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.51■□□□□ 0.23
HLA-DRAP01903 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 AP005018.1-201ENST00000525475 301 ntBASIC16.51■□□□□ 0.23
HLA-DRAP01903 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 CU634019.7-201ENST00000624153 1185 ntBASIC16.51■□□□□ 0.23
HLA-DRAP01903 FP236241.2-201ENST00000624906 1185 ntBASIC16.51■□□□□ 0.23
HLA-DRAP01903 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 AL033527.5-201ENST00000641382 801 ntBASIC16.51■□□□□ 0.23
HLA-DRAP01903 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DRAP01903 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 AL157414.3-201ENST00000624276 1954 ntBASIC16.51■□□□□ 0.23
HLA-DRAP01903 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DRAP01903 TNRC18P2-201ENST00000417666 2714 ntBASIC16.51■□□□□ 0.23
HLA-DRAP01903 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms