Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TOMM40O96008 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.14□□□□□ -0.47
TOMM40O96008 FAM58DP-201ENST00000428076 619 ntBASIC12.14□□□□□ -0.47
TOMM40O96008 RBPMS2P1-201ENST00000437762 623 ntBASIC12.14□□□□□ -0.47
TOMM40O96008 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.14□□□□□ -0.47
TOMM40O96008 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.14□□□□□ -0.47
TOMM40O96008 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.14□□□□□ -0.47
TOMM40O96008 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.14□□□□□ -0.47
TOMM40O96008 AP000344.2-201ENST00000512987 629 ntBASIC12.14□□□□□ -0.47
TOMM40O96008 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.14□□□□□ -0.47
TOMM40O96008 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.14□□□□□ -0.47
TOMM40O96008 RN7SL828P-201ENST00000607615 303 ntBASIC12.14□□□□□ -0.47
TOMM40O96008 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.14□□□□□ -0.47
TOMM40O96008 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.14□□□□□ -0.47
TOMM40O96008 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TOMM40O96008 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.14□□□□□ -0.47
TOMM40O96008 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.14□□□□□ -0.47
TOMM40O96008 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TOMM40O96008 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TOMM40O96008 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.14□□□□□ -0.47
TOMM40O96008 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TOMM40O96008 LINC00552-201ENST00000625151 2579 ntBASIC12.14□□□□□ -0.47
TOMM40O96008 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.14□□□□□ -0.47
TOMM40O96008 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.14□□□□□ -0.47
TOMM40O96008 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TOMM40O96008 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.14□□□□□ -0.47
TOMM40O96008 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TOMM40O96008 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.13□□□□□ -0.47
TOMM40O96008 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
TOMM40O96008 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TOMM40O96008 ZBED1P1-201ENST00000502364 1930 ntBASIC12.13□□□□□ -0.47
TOMM40O96008 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.13□□□□□ -0.47
TOMM40O96008 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.13□□□□□ -0.47
TOMM40O96008 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.13□□□□□ -0.47
TOMM40O96008 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
TOMM40O96008 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.13□□□□□ -0.47
TOMM40O96008 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TOMM40O96008 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.13□□□□□ -0.47
TOMM40O96008 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TOMM40O96008 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TOMM40O96008 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
TOMM40O96008 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.13□□□□□ -0.47
TOMM40O96008 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TOMM40O96008 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 AC004461.1-201ENST00000412461 403 ntBASIC12.13□□□□□ -0.47
TOMM40O96008 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.13□□□□□ -0.47
TOMM40O96008 HIST3H2BA-201ENST00000436555 524 ntBASIC12.13□□□□□ -0.47
TOMM40O96008 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 YBX1P5-201ENST00000509441 847 ntBASIC12.13□□□□□ -0.47
TOMM40O96008 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TOMM40O96008 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.13□□□□□ -0.47
TOMM40O96008 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
TOMM40O96008 AC004835.2-201ENST00000603762 682 ntBASIC12.13□□□□□ -0.47
TOMM40O96008 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.13□□□□□ -0.47
TOMM40O96008 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TOMM40O96008 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
TOMM40O96008 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
TOMM40O96008 KRT8P12-202ENST00000472924 1397 ntBASIC12.13□□□□□ -0.47
TOMM40O96008 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TOMM40O96008 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TOMM40O96008 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.13□□□□□ -0.47
TOMM40O96008 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 FGD5P1-202ENST00000614866 2498 ntBASIC12.13□□□□□ -0.47
TOMM40O96008 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TOMM40O96008 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TOMM40O96008 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TOMM40O96008 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TOMM40O96008 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms