Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.23■□□□□ 0.35
GGPS1O95749 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GGPS1O95749 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GGPS1O95749 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GGPS1O95749 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.23■□□□□ 0.35
GGPS1O95749 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GGPS1O95749 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GGPS1O95749 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GGPS1O95749 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
GGPS1O95749 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GGPS1O95749 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GGPS1O95749 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
GGPS1O95749 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
GGPS1O95749 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 KRT8P14-201ENST00000414254 1442 ntBASIC17.22■□□□□ 0.35
GGPS1O95749 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.22■□□□□ 0.35
GGPS1O95749 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 AC022532.1-201ENST00000624563 1728 ntBASIC17.22■□□□□ 0.35
GGPS1O95749 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GGPS1O95749 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.22■□□□□ 0.35
GGPS1O95749 PFN1P12-201ENST00000455938 534 ntBASIC17.22■□□□□ 0.35
GGPS1O95749 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.22■□□□□ 0.35
GGPS1O95749 FAM86HP-204ENST00000513466 959 ntBASIC17.22■□□□□ 0.35
GGPS1O95749 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
GGPS1O95749 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.22■□□□□ 0.35
GGPS1O95749 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
GGPS1O95749 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.22■□□□□ 0.35
GGPS1O95749 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.22■□□□□ 0.35
GGPS1O95749 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.22■□□□□ 0.35
GGPS1O95749 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.22■□□□□ 0.35
GGPS1O95749 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GGPS1O95749 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
GGPS1O95749 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.21■□□□□ 0.35
GGPS1O95749 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 TPM3P8-201ENST00000330554 643 ntBASIC17.21■□□□□ 0.35
GGPS1O95749 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.21■□□□□ 0.35
GGPS1O95749 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GGPS1O95749 RPL5P21-201ENST00000404620 815 ntBASIC17.21■□□□□ 0.35
GGPS1O95749 CD8B2-202ENST00000417670 633 ntBASIC17.21■□□□□ 0.35
GGPS1O95749 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.21■□□□□ 0.35
GGPS1O95749 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.21■□□□□ 0.35
GGPS1O95749 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.21■□□□□ 0.35
GGPS1O95749 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 AC091271.1-201ENST00000611877 1162 ntBASIC17.21■□□□□ 0.35
GGPS1O95749 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.21■□□□□ 0.35
GGPS1O95749 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GGPS1O95749 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GGPS1O95749 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GGPS1O95749 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
GGPS1O95749 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GGPS1O95749 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GGPS1O95749 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GGPS1O95749 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.2■□□□□ 0.34
GGPS1O95749 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GGPS1O95749 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GGPS1O95749 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.2■□□□□ 0.34
GGPS1O95749 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GGPS1O95749 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GGPS1O95749 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.2■□□□□ 0.34
GGPS1O95749 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.2■□□□□ 0.34
GGPS1O95749 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GGPS1O95749 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.2■□□□□ 0.34
GGPS1O95749 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GGPS1O95749 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GGPS1O95749 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.2■□□□□ 0.34
GGPS1O95749 MIR326-201ENST00000362220 95 ntBASIC17.2■□□□□ 0.34
GGPS1O95749 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.2■□□□□ 0.34
GGPS1O95749 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms