Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
GPC4O75487 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.53■□□□□ 0.08
GPC4O75487 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
GPC4O75487 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.53■□□□□ 0.08
GPC4O75487 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.52■□□□□ 0.08
GPC4O75487 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.52■□□□□ 0.08
GPC4O75487 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
GPC4O75487 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.52■□□□□ 0.08
GPC4O75487 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
GPC4O75487 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
GPC4O75487 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.52■□□□□ 0.08
GPC4O75487 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.52■□□□□ 0.08
GPC4O75487 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.52■□□□□ 0.08
GPC4O75487 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.52■□□□□ 0.08
GPC4O75487 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
GPC4O75487 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.52■□□□□ 0.08
GPC4O75487 AC004890.2-204ENST00000481968 304 ntBASIC15.52■□□□□ 0.08
GPC4O75487 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.52■□□□□ 0.08
GPC4O75487 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.52■□□□□ 0.08
GPC4O75487 SDHAP3-202ENST00000515467 728 ntBASIC15.52■□□□□ 0.08
GPC4O75487 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.52■□□□□ 0.08
GPC4O75487 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.52■□□□□ 0.08
GPC4O75487 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.52■□□□□ 0.08
GPC4O75487 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.52■□□□□ 0.08
GPC4O75487 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.52■□□□□ 0.08
GPC4O75487 AL390754.1-201ENST00000619088 582 ntBASIC15.52■□□□□ 0.08
GPC4O75487 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GPC4O75487 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.52■□□□□ 0.08
GPC4O75487 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GPC4O75487 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
GPC4O75487 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
GPC4O75487 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
GPC4O75487 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GPC4O75487 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.52■□□□□ 0.07
GPC4O75487 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
GPC4O75487 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GPC4O75487 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
GPC4O75487 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
GPC4O75487 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
GPC4O75487 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
GPC4O75487 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
GPC4O75487 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 C18orf15-201ENST00000623680 2534 ntBASIC15.51■□□□□ 0.07
GPC4O75487 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.51■□□□□ 0.07
GPC4O75487 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.51■□□□□ 0.07
GPC4O75487 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.51■□□□□ 0.07
GPC4O75487 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.51■□□□□ 0.07
GPC4O75487 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
GPC4O75487 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
GPC4O75487 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
GPC4O75487 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GPC4O75487 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms