Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ZNF253O75346 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ZNF253O75346 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF253O75346 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
ZNF253O75346 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
ZNF253O75346 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNF253O75346 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ZNF253O75346 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ZNF253O75346 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
ZNF253O75346 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
ZNF253O75346 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 EEF1DP4-201ENST00000446006 880 ntBASIC12.09□□□□□ -0.47
ZNF253O75346 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ZNF253O75346 AC074386.1-202ENST00000463561 864 ntBASIC12.09□□□□□ -0.47
ZNF253O75346 RNA5SP419-201ENST00000515908 135 ntBASIC12.09□□□□□ -0.47
ZNF253O75346 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNF253O75346 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ZNF253O75346 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.09□□□□□ -0.47
ZNF253O75346 PDPK2P-202ENST00000562415 1191 ntBASIC12.09□□□□□ -0.47
ZNF253O75346 AC145285.3-201ENST00000564603 959 ntBASIC12.09□□□□□ -0.47
ZNF253O75346 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNF253O75346 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNF253O75346 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.09□□□□□ -0.47
ZNF253O75346 AC064836.3-201ENST00000607928 673 ntBASIC12.09□□□□□ -0.47
ZNF253O75346 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
ZNF253O75346 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.09□□□□□ -0.47
ZNF253O75346 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
ZNF253O75346 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 C18orf15-201ENST00000623680 2534 ntBASIC12.09□□□□□ -0.47
ZNF253O75346 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
ZNF253O75346 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.09□□□□□ -0.47
ZNF253O75346 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNF253O75346 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.09□□□□□ -0.47
ZNF253O75346 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 AC092127.1-201ENST00000567093 3455 ntBASIC12.09□□□□□ -0.47
ZNF253O75346 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZNF253O75346 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZNF253O75346 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZNF253O75346 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZNF253O75346 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
ZNF253O75346 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZNF253O75346 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.08□□□□□ -0.47
ZNF253O75346 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
ZNF253O75346 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ZNF253O75346 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF253O75346 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ZNF253O75346 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF253O75346 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ZNF253O75346 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.08□□□□□ -0.48
ZNF253O75346 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF253O75346 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.08□□□□□ -0.48
ZNF253O75346 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF253O75346 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.08□□□□□ -0.48
ZNF253O75346 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.08□□□□□ -0.48
ZNF253O75346 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF253O75346 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.08□□□□□ -0.48
ZNF253O75346 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF253O75346 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
ZNF253O75346 AP002472.1-201ENST00000577490 586 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms