Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.56■□□□□ 0.08
PRAMEF11O60813 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 AGAP7P-201ENST00000582299 2062 ntBASIC15.56■□□□□ 0.08
PRAMEF11O60813 AGAP14-201ENST00000624701 2060 ntBASIC15.56■□□□□ 0.08
PRAMEF11O60813 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 TMEM14DP-201ENST00000422205 345 ntBASIC15.56■□□□□ 0.08
PRAMEF11O60813 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 GIMAP3P-201ENST00000495150 836 ntBASIC15.56■□□□□ 0.08
PRAMEF11O60813 USP32P1-208ENST00000506594 1164 ntBASIC15.56■□□□□ 0.08
PRAMEF11O60813 KRT18P25-201ENST00000508931 1278 ntBASIC15.56■□□□□ 0.08
PRAMEF11O60813 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 AC008735.3-201ENST00000596646 500 ntBASIC15.56■□□□□ 0.08
PRAMEF11O60813 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 AC134312.5-201ENST00000568031 1313 ntBASIC15.56■□□□□ 0.08
PRAMEF11O60813 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.56■□□□□ 0.08
PRAMEF11O60813 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRAMEF11O60813 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 KRT8P35-201ENST00000483942 1338 ntBASIC15.55■□□□□ 0.08
PRAMEF11O60813 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 ACTBP8-201ENST00000403258 1108 ntBASIC15.55■□□□□ 0.08
PRAMEF11O60813 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 FER1L4-210ENST00000615531 5998 ntBASIC15.55■□□□□ 0.08
PRAMEF11O60813 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.55■□□□□ 0.08
PRAMEF11O60813 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRAMEF11O60813 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms