Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
HCN1O60741 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HCN1O60741 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCN1O60741 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.48□□□□□ -0.09
HCN1O60741 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.48□□□□□ -0.09
HCN1O60741 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.48□□□□□ -0.09
HCN1O60741 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCN1O60741 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HCN1O60741 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HCN1O60741 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.48□□□□□ -0.09
HCN1O60741 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HCN1O60741 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.47□□□□□ -0.09
HCN1O60741 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.47□□□□□ -0.09
HCN1O60741 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.47□□□□□ -0.09
HCN1O60741 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 LINC01101-201ENST00000622953 1884 ntBASIC14.47□□□□□ -0.09
HCN1O60741 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HCN1O60741 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.47□□□□□ -0.09
HCN1O60741 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.47□□□□□ -0.09
HCN1O60741 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.47□□□□□ -0.09
HCN1O60741 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.47□□□□□ -0.09
HCN1O60741 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.47□□□□□ -0.09
HCN1O60741 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.47□□□□□ -0.09
HCN1O60741 GAPDHP21-201ENST00000450301 1010 ntBASIC14.47□□□□□ -0.09
HCN1O60741 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.47□□□□□ -0.09
HCN1O60741 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.47□□□□□ -0.09
HCN1O60741 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.47□□□□□ -0.09
HCN1O60741 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.47□□□□□ -0.09
HCN1O60741 AC140912.1-201ENST00000577171 1054 ntBASIC14.47□□□□□ -0.09
HCN1O60741 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
HCN1O60741 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.47□□□□□ -0.09
HCN1O60741 AC074044.1-201ENST00000609673 707 ntBASIC14.47□□□□□ -0.09
HCN1O60741 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.47□□□□□ -0.09
HCN1O60741 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.47□□□□□ -0.09
HCN1O60741 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.47□□□□□ -0.09
HCN1O60741 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.47□□□□□ -0.09
HCN1O60741 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.47□□□□□ -0.09
HCN1O60741 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HCN1O60741 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.47□□□□□ -0.09
HCN1O60741 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.46□□□□□ -0.09
HCN1O60741 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.46□□□□□ -0.09
HCN1O60741 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.46□□□□□ -0.09
HCN1O60741 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HCN1O60741 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
HCN1O60741 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.46□□□□□ -0.09
HCN1O60741 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.46□□□□□ -0.09
HCN1O60741 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.46□□□□□ -0.09
HCN1O60741 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.46□□□□□ -0.09
HCN1O60741 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.46□□□□□ -0.09
HCN1O60741 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 AL359258.3-201ENST00000622910 2331 ntBASIC14.46□□□□□ -0.09
HCN1O60741 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HCN1O60741 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 SPDYE19P-201ENST00000338590 713 ntBASIC14.46□□□□□ -0.09
HCN1O60741 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HCN1O60741 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms