Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
LCMT2O60294 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.72□□□□□ -0.05
LCMT2O60294 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.72□□□□□ -0.05
LCMT2O60294 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LCMT2O60294 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LCMT2O60294 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.72□□□□□ -0.05
LCMT2O60294 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LCMT2O60294 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LCMT2O60294 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LCMT2O60294 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.72□□□□□ -0.05
LCMT2O60294 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.72□□□□□ -0.05
LCMT2O60294 COX20P2-201ENST00000452636 358 ntBASIC14.72□□□□□ -0.05
LCMT2O60294 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.72□□□□□ -0.05
LCMT2O60294 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.72□□□□□ -0.05
LCMT2O60294 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.72□□□□□ -0.05
LCMT2O60294 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.72□□□□□ -0.05
LCMT2O60294 AL596325.1-201ENST00000563991 1082 ntBASIC14.72□□□□□ -0.05
LCMT2O60294 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.72□□□□□ -0.05
LCMT2O60294 AC027307.3-201ENST00000594262 1100 ntBASIC14.72□□□□□ -0.05
LCMT2O60294 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.72□□□□□ -0.05
LCMT2O60294 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.72□□□□□ -0.05
LCMT2O60294 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.72□□□□□ -0.05
LCMT2O60294 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 REXO1L4P-201ENST00000605109 1937 ntBASIC14.72□□□□□ -0.05
LCMT2O60294 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LCMT2O60294 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.71□□□□□ -0.05
LCMT2O60294 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
LCMT2O60294 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 AC093525.8-201ENST00000624099 1342 ntBASIC14.71□□□□□ -0.05
LCMT2O60294 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.71□□□□□ -0.05
LCMT2O60294 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.71□□□□□ -0.05
LCMT2O60294 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LCMT2O60294 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.71□□□□□ -0.05
LCMT2O60294 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 SOCS2P1-201ENST00000417727 557 ntBASIC14.71□□□□□ -0.05
LCMT2O60294 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.71□□□□□ -0.05
LCMT2O60294 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.71□□□□□ -0.05
LCMT2O60294 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.71□□□□□ -0.05
LCMT2O60294 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.71□□□□□ -0.05
LCMT2O60294 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.71□□□□□ -0.05
LCMT2O60294 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.71□□□□□ -0.05
LCMT2O60294 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.71□□□□□ -0.05
LCMT2O60294 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.71□□□□□ -0.05
LCMT2O60294 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.71□□□□□ -0.05
LCMT2O60294 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.71□□□□□ -0.05
LCMT2O60294 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.71□□□□□ -0.05
LCMT2O60294 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.71□□□□□ -0.05
LCMT2O60294 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
LCMT2O60294 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
LCMT2O60294 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
LCMT2O60294 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LCMT2O60294 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
LCMT2O60294 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LCMT2O60294 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
LCMT2O60294 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LCMT2O60294 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LCMT2O60294 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
LCMT2O60294 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.71□□□□□ -0.06
LCMT2O60294 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
LCMT2O60294 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LCMT2O60294 TCAF2P1-201ENST00000291129 2421 ntBASIC14.71□□□□□ -0.06
LCMT2O60294 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LCMT2O60294 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LCMT2O60294 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms