Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.74□□□□□ -0.21
TRAF3IP2O43734 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRAF3IP2O43734 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 AC236430.1-201ENST00000402231 743 ntBASIC13.73□□□□□ -0.21
TRAF3IP2O43734 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 AC002472.2-201ENST00000442739 958 ntBASIC13.73□□□□□ -0.21
TRAF3IP2O43734 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 AC026410.3-201ENST00000514280 936 ntBASIC13.73□□□□□ -0.21
TRAF3IP2O43734 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 SAMD11P1-201ENST00000571429 661 ntBASIC13.73□□□□□ -0.21
TRAF3IP2O43734 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 AC004233.3-201ENST00000607794 1269 ntBASIC13.73□□□□□ -0.21
TRAF3IP2O43734 AC093726.1-201ENST00000608064 963 ntBASIC13.73□□□□□ -0.21
TRAF3IP2O43734 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 AP000845.1-201ENST00000581677 2131 ntBASIC13.73□□□□□ -0.21
TRAF3IP2O43734 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAF3IP2O43734 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 AL391825.1-201ENST00000457671 1364 ntBASIC13.72□□□□□ -0.21
TRAF3IP2O43734 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 ZBED1P1-201ENST00000502364 1930 ntBASIC13.72□□□□□ -0.21
TRAF3IP2O43734 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 AC103702.1-201ENST00000548801 2630 ntBASIC13.72□□□□□ -0.21
TRAF3IP2O43734 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 MIR8072-201ENST00000614241 80 ntBASIC13.72□□□□□ -0.21
TRAF3IP2O43734 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms