Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RNF113AO15541 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF113AO15541 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF113AO15541 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
RNF113AO15541 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
RNF113AO15541 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
RNF113AO15541 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
RNF113AO15541 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF113AO15541 ACTBP8-201ENST00000403258 1108 ntBASIC18.4■□□□□ 0.54
RNF113AO15541 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF113AO15541 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF113AO15541 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF113AO15541 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF113AO15541 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF113AO15541 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF113AO15541 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF113AO15541 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF113AO15541 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF113AO15541 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF113AO15541 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF113AO15541 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.4■□□□□ 0.54
RNF113AO15541 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RNF113AO15541 AC233724.13-201ENST00000598383 410 ntBASIC18.4■□□□□ 0.54
RNF113AO15541 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF113AO15541 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF113AO15541 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF113AO15541 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 AC144831.1-201ENST00000573312 2656 ntBASIC18.4■□□□□ 0.54
RNF113AO15541 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF113AO15541 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF113AO15541 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF113AO15541 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.39■□□□□ 0.54
RNF113AO15541 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF113AO15541 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF113AO15541 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF113AO15541 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF113AO15541 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF113AO15541 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF113AO15541 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RNF113AO15541 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF113AO15541 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF113AO15541 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF113AO15541 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF113AO15541 AC005229.1-201ENST00000392885 409 ntBASIC18.39■□□□□ 0.53
RNF113AO15541 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF113AO15541 U91328.1-201ENST00000437528 223 ntBASIC18.39■□□□□ 0.53
RNF113AO15541 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF113AO15541 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF113AO15541 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF113AO15541 AC106760.1-201ENST00000508690 800 ntBASIC18.39■□□□□ 0.53
RNF113AO15541 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF113AO15541 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF113AO15541 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.39■□□□□ 0.53
RNF113AO15541 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF113AO15541 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF113AO15541 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF113AO15541 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF113AO15541 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RNF113AO15541 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF113AO15541 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF113AO15541 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF113AO15541 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF113AO15541 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF113AO15541 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
RNF113AO15541 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RNF113AO15541 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RNF113AO15541 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RNF113AO15541 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF113AO15541 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF113AO15541 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF113AO15541 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RNF113AO15541 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF113AO15541 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF113AO15541 LINC00554-201ENST00000564841 3011 ntBASIC18.38■□□□□ 0.53
RNF113AO15541 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF113AO15541 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF113AO15541 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms