Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
FOXN1O15353 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FOXN1O15353 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXN1O15353 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXN1O15353 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FOXN1O15353 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
FOXN1O15353 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.33■□□□□ 0.53
FOXN1O15353 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
FOXN1O15353 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.33■□□□□ 0.53
FOXN1O15353 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXN1O15353 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
FOXN1O15353 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FOXN1O15353 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.33■□□□□ 0.53
FOXN1O15353 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FOXN1O15353 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
FOXN1O15353 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 AL008707.1-201ENST00000422498 534 ntBASIC18.33■□□□□ 0.52
FOXN1O15353 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.33■□□□□ 0.52
FOXN1O15353 SERPINA13P-202ENST00000478994 924 ntBASIC18.33■□□□□ 0.52
FOXN1O15353 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXN1O15353 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.33■□□□□ 0.52
FOXN1O15353 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
FOXN1O15353 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXN1O15353 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXN1O15353 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 AC132192.2-201ENST00000596206 1147 ntBASIC18.33■□□□□ 0.52
FOXN1O15353 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.33■□□□□ 0.52
FOXN1O15353 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXN1O15353 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.33■□□□□ 0.52
FOXN1O15353 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.33■□□□□ 0.52
FOXN1O15353 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXN1O15353 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
FOXN1O15353 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.33■□□□□ 0.52
FOXN1O15353 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
FOXN1O15353 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXN1O15353 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN1O15353 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN1O15353 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.32■□□□□ 0.52
FOXN1O15353 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN1O15353 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXN1O15353 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
FOXN1O15353 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXN1O15353 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN1O15353 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN1O15353 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN1O15353 ACKR1-201ENST00000368121 1240 ntBASIC18.32■□□□□ 0.52
FOXN1O15353 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN1O15353 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
FOXN1O15353 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN1O15353 AL590640.2-201ENST00000457038 527 ntBASIC18.32■□□□□ 0.52
FOXN1O15353 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.32■□□□□ 0.52
FOXN1O15353 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
FOXN1O15353 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
FOXN1O15353 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.32■□□□□ 0.52
FOXN1O15353 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXN1O15353 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXN1O15353 CYP4F24P-201ENST00000586049 1580 ntBASIC18.32■□□□□ 0.52
FOXN1O15353 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
FOXN1O15353 U82695.1-201ENST00000635752 1889 ntBASIC18.32■□□□□ 0.52
FOXN1O15353 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN1O15353 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
FOXN1O15353 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
FOXN1O15353 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN1O15353 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
FOXN1O15353 AL136982.4-201ENST00000437689 1740 ntBASIC18.32■□□□□ 0.52
FOXN1O15353 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
FOXN1O15353 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
FOXN1O15353 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXN1O15353 DBET-201ENST00000630918 3363 ntBASIC18.31■□□□□ 0.52
FOXN1O15353 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN1O15353 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXN1O15353 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN1O15353 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
FOXN1O15353 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN1O15353 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN1O15353 MIR648-201ENST00000385046 94 ntBASIC18.31■□□□□ 0.52
FOXN1O15353 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXN1O15353 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXN1O15353 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.31■□□□□ 0.52
FOXN1O15353 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.31■□□□□ 0.52
FOXN1O15353 NOC2LP1-201ENST00000450578 752 ntBASIC18.31■□□□□ 0.52
FOXN1O15353 AC012618.1-201ENST00000461223 412 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms