Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA3F8WFD2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 CTBP2P5-201ENST00000454986 1264 ntBASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 AC119751.2-201ENST00000504529 210 ntBASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 AC068587.3-201ENST00000526613 355 ntBASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 MIR6799-201ENST00000620297 69 ntBASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA3F8WFD2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 PDIA3P1-201ENST00000471856 1510 ntBASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 AL355864.2-201ENST00000447420 863 ntBASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 KLF2P4-201ENST00000451959 1225 ntBASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA3F8WFD2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms