Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 AC142381.1-201ENST00000426099 345 ntBASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 AF186996.4-201ENST00000467186 377 ntBASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 PRELID1P1-202ENST00000567272 903 ntBASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRDV1A0A1B0GX56 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 AC023090.2-201ENST00000625182 2110 ntBASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 KRT18P67-201ENST00000432816 1264 ntBASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 AC009947.1-201ENST00000444350 727 ntBASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 FAM215A-202ENST00000632077 792 ntBASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 AL645728.2-202ENST00000641679 227 ntBASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 TCAF1P1-201ENST00000414990 2232 ntBASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.57□□□□□ -0.24
TRDV1A0A1B0GX56 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.56□□□□□ -0.24
TRDV1A0A1B0GX56 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms