Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.08
CCDC187A0A096LP49 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 CYP46A4P-201ENST00000414953 267 ntBASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 NKAIN1P1-201ENST00000435754 582 ntBASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 AC245884.6-201ENST00000515672 1067 ntBASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 SAMD11P1-201ENST00000571429 661 ntBASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC187A0A096LP49 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 KRT8P4-201ENST00000509735 1454 ntBASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 KRT8P19-201ENST00000551916 1455 ntBASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 AL391280.1-201ENST00000506969 1062 ntBASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 AP001505.2-201ENST00000616815 443 ntBASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 AP001002.3-201ENST00000623482 206 ntBASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 AC084364.1-201ENST00000551967 1556 ntBASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC187A0A096LP49 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms