Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NPIPA1Q9UND3 AC018892.3-201ENST00000623986 2499 ntBASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 AC092850.2-201ENST00000623821 2697 ntBASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 TOMM22P5-201ENST00000416399 439 ntBASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 RPL13AP25-201ENST00000484130 612 ntBASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 USP32P1-208ENST00000506594 1164 ntBASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 BRI3BPP1-201ENST00000594224 787 ntBASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 AL139384.1-201ENST00000612143 3047 ntBASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA1Q9UND3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 AC119751.2-201ENST00000504529 210 ntBASIC14.25□□□□□ -0.13
NPIPA1Q9UND3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms