Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.79□□□□□ -0.36
CALYQ9NYX4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
CALYQ9NYX4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.79□□□□□ -0.36
CALYQ9NYX4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.79□□□□□ -0.36
CALYQ9NYX4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.79□□□□□ -0.36
CALYQ9NYX4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 AC005498.2-205ENST00000593218 784 ntBASIC12.79□□□□□ -0.36
CALYQ9NYX4 SRD5A3P1-201ENST00000603021 949 ntBASIC12.79□□□□□ -0.36
CALYQ9NYX4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.79□□□□□ -0.36
CALYQ9NYX4 AC004840.1-201ENST00000636359 365 ntBASIC12.79□□□□□ -0.36
CALYQ9NYX4 AL645728.2-202ENST00000641679 227 ntBASIC12.79□□□□□ -0.36
CALYQ9NYX4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CALYQ9NYX4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CALYQ9NYX4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CALYQ9NYX4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
CALYQ9NYX4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CALYQ9NYX4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.79□□□□□ -0.36
CALYQ9NYX4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CALYQ9NYX4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 AL589987.1-201ENST00000453380 819 ntBASIC12.78□□□□□ -0.36
CALYQ9NYX4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 AC104794.3-201ENST00000566840 1248 ntBASIC12.78□□□□□ -0.36
CALYQ9NYX4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 ZBED1P1-201ENST00000502364 1930 ntBASIC12.78□□□□□ -0.36
CALYQ9NYX4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CALYQ9NYX4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.78□□□□□ -0.36
CALYQ9NYX4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CALYQ9NYX4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CALYQ9NYX4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CALYQ9NYX4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.77□□□□□ -0.36
CALYQ9NYX4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CALYQ9NYX4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CALYQ9NYX4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.77□□□□□ -0.36
CALYQ9NYX4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CALYQ9NYX4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CALYQ9NYX4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CALYQ9NYX4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.77□□□□□ -0.36
CALYQ9NYX4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
CALYQ9NYX4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.77□□□□□ -0.36
CALYQ9NYX4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CALYQ9NYX4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms