Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 AC134915.1-201ENST00000426461 574 ntBASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 AL442647.2-201ENST00000429864 857 ntBASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 CRB3P1-201ENST00000449338 276 ntBASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 AC025181.2-201ENST00000606994 802 ntBASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 AC007431.3-201ENST00000623221 587 ntBASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SDHAF3Q9NRP4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 AL049840.4-201ENST00000602422 811 ntBASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 AL662799.1-202ENST00000614205 422 ntBASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 OR2I1P-210ENST00000642037 4691 ntBASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SDHAF3Q9NRP4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SDHAF3Q9NRP4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms