Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 RARRES2P9-201ENST00000565168 469 ntBASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.48□□□□□ -0.09
AMBRA1Q9C0C7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 INTS4P1-203ENST00000641008 3683 ntBASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 HLA-J-203ENST00000494367 1087 ntBASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 MTHFR-210ENST00000641407 2387 ntBASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 AC084364.1-201ENST00000551967 1556 ntBASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.47□□□□□ -0.09
AMBRA1Q9C0C7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 RPL5P21-201ENST00000404620 815 ntBASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 TSEN15P1-201ENST00000423257 515 ntBASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 AC005237.2-201ENST00000434368 219 ntBASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms