Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 BET1L-202ENST00000332865 533 ntTSL 5 BASIC10.26□□□□□ -0.77
LITAFQ99732 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
LITAFQ99732 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC10.26□□□□□ -0.77
LITAFQ99732 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC10.26□□□□□ -0.77
LITAFQ99732 SYS1-203ENST00000414310 795 ntTSL 3 BASIC10.26□□□□□ -0.77
LITAFQ99732 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
LITAFQ99732 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC10.26□□□□□ -0.77
LITAFQ99732 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 THTPA-204ENST00000554970 569 ntTSL 4 BASIC10.26□□□□□ -0.77
LITAFQ99732 THTPA-206ENST00000556015 535 ntTSL 3 BASIC10.26□□□□□ -0.77
LITAFQ99732 RPL28-209ENST00000560055 670 ntTSL 3 BASIC10.26□□□□□ -0.77
LITAFQ99732 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 SPTSSB-204ENST00000617024 1292 ntBASIC10.26□□□□□ -0.77
LITAFQ99732 AC133561.5-201ENST00000635547 218 ntBASIC10.26□□□□□ -0.77
LITAFQ99732 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC10.26□□□□□ -0.77
LITAFQ99732 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 FAM90A12P-201ENST00000519497 2375 ntBASIC10.26□□□□□ -0.77
LITAFQ99732 FAM90A24P-201ENST00000520792 2369 ntBASIC10.26□□□□□ -0.77
LITAFQ99732 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LITAFQ99732 AC118758.2-201ENST00000614242 2813 ntBASIC10.26□□□□□ -0.77
LITAFQ99732 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 BEND3P3-201ENST00000611030 2440 ntBASIC10.26□□□□□ -0.77
LITAFQ99732 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
LITAFQ99732 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
LITAFQ99732 CYP4F24P-201ENST00000586049 1580 ntBASIC10.26□□□□□ -0.77
LITAFQ99732 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 CROT-203ENST00000419147 2959 ntTSL 2 BASIC10.26□□□□□ -0.77
LITAFQ99732 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LITAFQ99732 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
LITAFQ99732 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
LITAFQ99732 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
LITAFQ99732 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
LITAFQ99732 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC10.25□□□□□ -0.77
LITAFQ99732 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 GUK1-204ENST00000366721 689 ntTSL 3 BASIC10.25□□□□□ -0.77
LITAFQ99732 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC10.25□□□□□ -0.77
LITAFQ99732 AL513480.1-201ENST00000451731 511 ntBASIC10.25□□□□□ -0.77
LITAFQ99732 AC098859.1-201ENST00000502915 1238 ntBASIC10.25□□□□□ -0.77
LITAFQ99732 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC10.25□□□□□ -0.77
LITAFQ99732 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LITAFQ99732 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC10.25□□□□□ -0.77
LITAFQ99732 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
LITAFQ99732 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC10.25□□□□□ -0.77
LITAFQ99732 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC10.25□□□□□ -0.77
LITAFQ99732 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC10.25□□□□□ -0.77
LITAFQ99732 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms