Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.24■□□□□ 0.51
SNX21Q969T3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.24■□□□□ 0.51
SNX21Q969T3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.24■□□□□ 0.51
SNX21Q969T3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.24■□□□□ 0.51
SNX21Q969T3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SNX21Q969T3 AC025048.3-201ENST00000590609 569 ntBASIC18.24■□□□□ 0.51
SNX21Q969T3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNX21Q969T3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
SNX21Q969T3 AC005702.4-201ENST00000618393 416 ntBASIC18.24■□□□□ 0.51
SNX21Q969T3 C20orf181-201ENST00000623918 480 ntBASIC18.24■□□□□ 0.51
SNX21Q969T3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNX21Q969T3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.24■□□□□ 0.51
SNX21Q969T3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNX21Q969T3 AL035456.1-201ENST00000456064 1369 ntBASIC18.24■□□□□ 0.51
SNX21Q969T3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
SNX21Q969T3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNX21Q969T3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
SNX21Q969T3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC18.23■□□□□ 0.51
SNX21Q969T3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SNX21Q969T3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SNX21Q969T3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SNX21Q969T3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.23■□□□□ 0.51
SNX21Q969T3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.23■□□□□ 0.51
SNX21Q969T3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SNX21Q969T3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SNX21Q969T3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 MKNK2P1-201ENST00000437526 628 ntBASIC18.23■□□□□ 0.51
SNX21Q969T3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.23■□□□□ 0.51
SNX21Q969T3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SNX21Q969T3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.23■□□□□ 0.51
SNX21Q969T3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.23■□□□□ 0.51
SNX21Q969T3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 KRT126P-201ENST00000549467 1181 ntBASIC18.23■□□□□ 0.51
SNX21Q969T3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.23■□□□□ 0.51
SNX21Q969T3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.23■□□□□ 0.51
SNX21Q969T3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.23■□□□□ 0.51
SNX21Q969T3 AC063926.3-201ENST00000624734 5658 ntBASIC18.23■□□□□ 0.51
SNX21Q969T3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.23■□□□□ 0.51
SNX21Q969T3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC18.23■□□□□ 0.51
SNX21Q969T3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SNX21Q969T3 AL121723.1-201ENST00000445194 1519 ntBASIC18.23■□□□□ 0.51
SNX21Q969T3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SNX21Q969T3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNX21Q969T3 AL360270.3-201ENST00000609118 1348 ntBASIC18.23■□□□□ 0.51
SNX21Q969T3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SNX21Q969T3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SNX21Q969T3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SNX21Q969T3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.22■□□□□ 0.51
SNX21Q969T3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.22■□□□□ 0.51
SNX21Q969T3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX21Q969T3 AL079307.3-201ENST00000556114 283 ntBASIC18.22■□□□□ 0.51
SNX21Q969T3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX21Q969T3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.22■□□□□ 0.51
SNX21Q969T3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
SNX21Q969T3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX21Q969T3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
SNX21Q969T3 BX640515.1-201ENST00000617215 977 ntBASIC18.22■□□□□ 0.51
SNX21Q969T3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SNX21Q969T3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX21Q969T3 AC105339.1-204ENST00000636249 355 ntBASIC18.22■□□□□ 0.51
SNX21Q969T3 AF228730.6-201ENST00000641497 218 ntBASIC18.22■□□□□ 0.51
SNX21Q969T3 AC084121.3-201ENST00000641716 218 ntBASIC18.22■□□□□ 0.51
SNX21Q969T3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SNX21Q969T3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC18.22■□□□□ 0.51
SNX21Q969T3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SNX21Q969T3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
SNX21Q969T3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SNX21Q969T3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SNX21Q969T3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX21Q969T3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.22■□□□□ 0.51
SNX21Q969T3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SNX21Q969T3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms