Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF34Q969K3 AC098850.1-201ENST00000419919 790 ntBASIC16.16■□□□□ 0.18
RNF34Q969K3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF34Q969K3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF34Q969K3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.16■□□□□ 0.18
RNF34Q969K3 SPDYE22P-201ENST00000582158 798 ntBASIC16.16■□□□□ 0.18
RNF34Q969K3 AC025181.2-201ENST00000606994 802 ntBASIC16.16■□□□□ 0.18
RNF34Q969K3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
RNF34Q969K3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF34Q969K3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RNF34Q969K3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF34Q969K3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF34Q969K3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RNF34Q969K3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF34Q969K3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF34Q969K3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF34Q969K3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF34Q969K3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RNF34Q969K3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF34Q969K3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF34Q969K3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF34Q969K3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF34Q969K3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF34Q969K3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF34Q969K3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 DGCR5-201ENST00000399539 862 ntBASIC16.15■□□□□ 0.18
RNF34Q969K3 RPL5P21-201ENST00000404620 815 ntBASIC16.15■□□□□ 0.18
RNF34Q969K3 AC134915.1-201ENST00000426461 574 ntBASIC16.15■□□□□ 0.18
RNF34Q969K3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.15■□□□□ 0.18
RNF34Q969K3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 SBF1P1-201ENST00000444527 5631 ntBASIC16.15■□□□□ 0.18
RNF34Q969K3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF34Q969K3 VDAC1P7-201ENST00000462417 847 ntBASIC16.15■□□□□ 0.18
RNF34Q969K3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.15■□□□□ 0.18
RNF34Q969K3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF34Q969K3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 AC092552.1-201ENST00000547243 906 ntBASIC16.15■□□□□ 0.18
RNF34Q969K3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF34Q969K3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.15■□□□□ 0.18
RNF34Q969K3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF34Q969K3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
RNF34Q969K3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF34Q969K3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF34Q969K3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF34Q969K3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF34Q969K3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF34Q969K3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF34Q969K3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF34Q969K3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
RNF34Q969K3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
RNF34Q969K3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF34Q969K3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF34Q969K3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF34Q969K3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF34Q969K3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF34Q969K3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF34Q969K3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF34Q969K3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RNF34Q969K3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF34Q969K3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF34Q969K3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF34Q969K3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
RNF34Q969K3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF34Q969K3 ELK1P1-201ENST00000485699 580 ntBASIC16.14■□□□□ 0.17
RNF34Q969K3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF34Q969K3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF34Q969K3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF34Q969K3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
RNF34Q969K3 AC133539.2-201ENST00000604757 467 ntBASIC16.14■□□□□ 0.17
RNF34Q969K3 TMEM261P1-201ENST00000604899 340 ntBASIC16.14■□□□□ 0.17
RNF34Q969K3 AC025048.6-201ENST00000634326 1161 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms