Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 AC011742.3-201ENST00000439053 820 ntBASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 EID1-202ENST00000560490 584 ntTSL 3 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 AC013355.1-201ENST00000562625 723 ntBASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 BNIP3P13-201ENST00000599968 566 ntBASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 AC009090.5-201ENST00000624886 2285 ntBASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 CICP13-201ENST00000422015 2789 ntBASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
RAPGEF4Q8WZA2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 LINC02199-201ENST00000506655 2702 ntBASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 AC100757.4-201ENST00000626934 759 ntBASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 AL157414.3-201ENST00000624276 1954 ntBASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 AL360270.3-201ENST00000609118 1348 ntBASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.97■□□□□ 0.79
RAPGEF4Q8WZA2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 TUBB8P8-201ENST00000458717 1058 ntBASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 AC026740.1-201ENST00000607068 791 ntBASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 AL136301.1-201ENST00000615830 422 ntBASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 AC004923.1-202ENST00000642106 209 ntBASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAPGEF4Q8WZA2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
RAPGEF4Q8WZA2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAPGEF4Q8WZA2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms