Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.72■□□□□ 0.11
PTCD2Q8WV60 RPL13P2-201ENST00000440687 659 ntBASIC15.72■□□□□ 0.11
PTCD2Q8WV60 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 API5-211ENST00000534695 560 ntTSL 5 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 CHCHD2P3-201ENST00000603038 451 ntBASIC15.72■□□□□ 0.11
PTCD2Q8WV60 AC074044.1-201ENST00000609673 707 ntBASIC15.72■□□□□ 0.11
PTCD2Q8WV60 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.72■□□□□ 0.11
PTCD2Q8WV60 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTCD2Q8WV60 AC068587.6-202ENST00000641839 5619 ntBASIC15.71■□□□□ 0.11
PTCD2Q8WV60 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 AC023310.3-201ENST00000557027 670 ntBASIC15.71■□□□□ 0.11
PTCD2Q8WV60 AC100756.1-201ENST00000562736 682 ntBASIC15.71■□□□□ 0.11
PTCD2Q8WV60 AC138749.3-201ENST00000567691 622 ntBASIC15.71■□□□□ 0.11
PTCD2Q8WV60 AC116165.1-201ENST00000611806 668 ntBASIC15.71■□□□□ 0.11
PTCD2Q8WV60 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.71■□□□□ 0.11
PTCD2Q8WV60 AL645728.2-202ENST00000641679 227 ntBASIC15.71■□□□□ 0.11
PTCD2Q8WV60 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTCD2Q8WV60 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTCD2Q8WV60 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.71■□□□□ 0.1
PTCD2Q8WV60 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
PTCD2Q8WV60 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTCD2Q8WV60 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.71■□□□□ 0.1
PTCD2Q8WV60 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTCD2Q8WV60 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTCD2Q8WV60 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 DBET-201ENST00000630918 3363 ntBASIC15.7■□□□□ 0.1
PTCD2Q8WV60 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTCD2Q8WV60 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms