Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 SLED1-202ENST00000512051 380 ntBASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 AC010336.2-201ENST00000564226 506 ntBASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 AC004449.1-201ENST00000564240 433 ntBASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 AC140878.1-201ENST00000565277 250 ntBASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 AC073592.8-201ENST00000624126 511 ntBASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ZNF439Q8NDP4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 FAM45BP-202ENST00000592932 1624 ntBASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 AC069120.2-201ENST00000524091 540 ntBASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 AC093028.1-201ENST00000622998 982 ntBASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF439Q8NDP4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms