Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 NUS1P3-201ENST00000423502 862 ntBASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 NME2P1-201ENST00000426182 414 ntBASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 HLA-K-203ENST00000430151 1046 ntBASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 AC093433.1-201ENST00000458048 571 ntBASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 RN7SL837P-201ENST00000463010 287 ntBASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 AP001063.1-201ENST00000568332 529 ntBASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 DBET-201ENST00000630918 3363 ntBASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 AL358472.5-202ENST00000641448 1267 ntBASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 ZBED1P1-201ENST00000502364 1930 ntBASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 AL157414.3-201ENST00000624276 1954 ntBASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZIC4Q8N9L1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 COX5BP8-201ENST00000416911 349 ntBASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 ACTG1P3-201ENST00000431775 1114 ntBASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 INE1-201ENST00000456273 945 ntBASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 AC006058.4-201ENST00000624016 1670 ntBASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 REXO1L5P-201ENST00000622260 2098 ntBASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.59□□□□□ -0.23
ZIC4Q8N9L1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms