Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
NPAS3Q8IXF0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS3Q8IXF0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.86■□□□□ 0.13
NPAS3Q8IXF0 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.86■□□□□ 0.13
NPAS3Q8IXF0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NPAS3Q8IXF0 FER1L4-210ENST00000615531 5998 ntBASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 AC016700.1-201ENST00000429424 312 ntBASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 NKAIN1P1-201ENST00000435754 582 ntBASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 EIF4HP1-201ENST00000453115 687 ntBASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 AL391280.1-201ENST00000506969 1062 ntBASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 AC044849.1-201ENST00000519737 1188 ntBASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 MIR3619-201ENST00000579667 83 ntBASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 AC138627.1-207ENST00000641560 1006 ntBASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 AL645728.2-202ENST00000641679 227 ntBASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.85■□□□□ 0.13
NPAS3Q8IXF0 AC112504.1-201ENST00000623415 1841 ntBASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 KRT8P4-201ENST00000509735 1454 ntBASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 HIST2H2BB-201ENST00000449108 381 ntBASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 UPF3AP2-201ENST00000457924 1132 ntBASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 AC138649.2-201ENST00000615886 705 ntBASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 AC015967.2-201ENST00000624092 234 ntBASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 AC006435.4-201ENST00000625037 234 ntBASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 AL356737.1-201ENST00000634391 234 ntBASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 AC127383.1-201ENST00000444697 1800 ntBASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NPAS3Q8IXF0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms