Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 RPL5P21-201ENST00000404620 815 ntBASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 C2orf27AP3-201ENST00000434123 579 ntBASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 RPS2P32-201ENST00000439199 892 ntBASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 AL354718.3-201ENST00000616414 581 ntBASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 CR382287.1-201ENST00000623954 586 ntBASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 AC007787.1-201ENST00000588095 1583 ntBASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 KLF2P2-201ENST00000416807 1039 ntBASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 AC145423.3-201ENST00000615987 467 ntBASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.22■□□□□ 0.19
SCN4BQ8IWT1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 AC132872.4-202ENST00000622924 2756 ntBASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 AC093525.8-201ENST00000624099 1342 ntBASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCN4BQ8IWT1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms