Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC092658.1-201ENST00000505836 891 ntBASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 AC009542.2-202ENST00000619004 1067 ntBASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 AC006453.4-201ENST00000636949 1252 ntBASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 AL360270.3-201ENST00000609118 1348 ntBASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 YBX1P6-201ENST00000442962 1002 ntBASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 AC022616.1-201ENST00000518688 554 ntBASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 MIR6799-201ENST00000620297 69 ntBASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 AC046158.3-201ENST00000624947 2558 ntBASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC60Q8IWA6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 MIR1202-201ENST00000408529 83 ntBASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 MIR1908-201ENST00000410394 80 ntBASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 DUX4L45-201ENST00000566406 1057 ntBASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 ENPP7P14-201ENST00000621765 1040 ntBASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC60Q8IWA6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms