Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 RNMTL1P1-201ENST00000454103 560 ntBASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 MIR4683-201ENST00000579659 81 ntBASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 RN7SL163P-201ENST00000583100 276 ntBASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 HINT2P1-201ENST00000419438 481 ntBASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 CICP13-201ENST00000422015 2789 ntBASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 AC026740.1-201ENST00000607068 791 ntBASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 AL358472.3-201ENST00000608147 415 ntBASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 AL136301.1-201ENST00000615830 422 ntBASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 AC009090.5-201ENST00000624886 2285 ntBASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 AC004923.1-202ENST00000642106 209 ntBASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPAS4Q8IUM7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 RN7SKP175-201ENST00000408472 289 ntBASIC16.31■□□□□ 0.2
NPAS4Q8IUM7 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms