Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 AC109322.1-201ENST00000524499 1264 ntBASIC13.81□□□□□ -0.2
LRRC28Q86X40 SLC25A39P2-201ENST00000537614 270 ntBASIC13.81□□□□□ -0.2
LRRC28Q86X40 AL512356.2-201ENST00000546955 174 ntBASIC13.81□□□□□ -0.2
LRRC28Q86X40 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 BX640514.1-201ENST00000583223 1918 ntBASIC13.8□□□□□ -0.2
LRRC28Q86X40 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.8□□□□□ -0.2
LRRC28Q86X40 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 GPS2P2-201ENST00000430745 888 ntBASIC13.8□□□□□ -0.2
LRRC28Q86X40 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 RBPMS2P1-201ENST00000437762 623 ntBASIC13.8□□□□□ -0.2
LRRC28Q86X40 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 PRYP6-201ENST00000514804 343 ntBASIC13.8□□□□□ -0.2
LRRC28Q86X40 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 AC027796.2-201ENST00000575326 344 ntBASIC13.8□□□□□ -0.2
LRRC28Q86X40 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 MIR4321-201ENST00000592276 80 ntBASIC13.8□□□□□ -0.2
LRRC28Q86X40 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 AP001059.3-201ENST00000619053 235 ntBASIC13.8□□□□□ -0.2
LRRC28Q86X40 AC093028.1-201ENST00000622998 982 ntBASIC13.8□□□□□ -0.2
LRRC28Q86X40 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRRC28Q86X40 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRRC28Q86X40 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRRC28Q86X40 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LRRC28Q86X40 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms