Protein–RNA interactions for Protein: Q3B726

TWISTNB, DNA-directed RNA polymerase I subunit RPA43, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNBQ3B726 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 KRT18P25-201ENST00000508931 1278 ntBASIC19.69■□□□□ 0.74
TWISTNBQ3B726 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 AC106886.1-201ENST00000568660 600 ntBASIC19.69■□□□□ 0.74
TWISTNBQ3B726 AL162274.1-201ENST00000617191 1098 ntBASIC19.69■□□□□ 0.74
TWISTNBQ3B726 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 KRT8P35-201ENST00000483942 1338 ntBASIC19.69■□□□□ 0.74
TWISTNBQ3B726 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 LINC00554-201ENST00000564841 3011 ntBASIC19.69■□□□□ 0.74
TWISTNBQ3B726 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 REXO1L2P-201ENST00000425429 2069 ntBASIC19.69■□□□□ 0.74
TWISTNBQ3B726 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TWISTNBQ3B726 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 AC023157.3-201ENST00000619086 2088 ntBASIC19.68■□□□□ 0.74
TWISTNBQ3B726 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 AC092933.1-201ENST00000393644 945 ntBASIC19.68■□□□□ 0.74
TWISTNBQ3B726 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 AC112492.5-201ENST00000421897 457 ntBASIC19.68■□□□□ 0.74
TWISTNBQ3B726 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 GNRHR2-203ENST00000581100 1187 ntBASIC19.68■□□□□ 0.74
TWISTNBQ3B726 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 AC144831.1-201ENST00000573312 2656 ntBASIC19.68■□□□□ 0.74
TWISTNBQ3B726 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.68■□□□□ 0.74
TWISTNBQ3B726 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 AL355864.2-201ENST00000447420 863 ntBASIC19.67■□□□□ 0.74
TWISTNBQ3B726 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 CROCCP4-201ENST00000457096 498 ntBASIC19.67■□□□□ 0.74
TWISTNBQ3B726 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 KRT17P8-201ENST00000540749 863 ntBASIC19.67■□□□□ 0.74
TWISTNBQ3B726 AL022328.1-201ENST00000610050 478 ntBASIC19.67■□□□□ 0.74
TWISTNBQ3B726 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TWISTNBQ3B726 AC145423.3-201ENST00000615987 467 ntBASIC19.67■□□□□ 0.74
TWISTNBQ3B726 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms