Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL16A1Q07092 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL16A1Q07092 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL16A1Q07092 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
COL16A1Q07092 MIR645-201ENST00000385283 94 ntBASIC20.03■□□□□ 0.8
COL16A1Q07092 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL16A1Q07092 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL16A1Q07092 CSNK1G2P1-201ENST00000442675 955 ntBASIC20.03■□□□□ 0.8
COL16A1Q07092 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC20.03■□□□□ 0.8
COL16A1Q07092 GNG10P1-201ENST00000452289 199 ntBASIC20.03■□□□□ 0.8
COL16A1Q07092 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL16A1Q07092 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC20.03■□□□□ 0.8
COL16A1Q07092 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC20.03■□□□□ 0.8
COL16A1Q07092 AC226150.1-201ENST00000544259 466 ntBASIC20.03■□□□□ 0.8
COL16A1Q07092 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC20.03■□□□□ 0.8
COL16A1Q07092 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC20.03■□□□□ 0.8
COL16A1Q07092 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
COL16A1Q07092 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL16A1Q07092 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.03■□□□□ 0.8
COL16A1Q07092 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL16A1Q07092 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL16A1Q07092 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
COL16A1Q07092 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL16A1Q07092 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL16A1Q07092 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.03■□□□□ 0.8
COL16A1Q07092 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.03■□□□□ 0.8
COL16A1Q07092 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.03■□□□□ 0.8
COL16A1Q07092 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL16A1Q07092 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COL16A1Q07092 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL16A1Q07092 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL16A1Q07092 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
COL16A1Q07092 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL16A1Q07092 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COL16A1Q07092 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL16A1Q07092 DUX4L50-201ENST00000455245 715 ntBASIC20.02■□□□□ 0.8
COL16A1Q07092 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC20.02■□□□□ 0.8
COL16A1Q07092 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL16A1Q07092 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL16A1Q07092 NAV1-210ENST00000593583 726 ntBASIC20.02■□□□□ 0.8
COL16A1Q07092 AC007250.1-201ENST00000608934 338 ntBASIC20.02■□□□□ 0.8
COL16A1Q07092 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL16A1Q07092 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL16A1Q07092 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.02■□□□□ 0.8
COL16A1Q07092 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL16A1Q07092 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.02■□□□□ 0.8
COL16A1Q07092 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
COL16A1Q07092 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC20.02■□□□□ 0.8
COL16A1Q07092 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL16A1Q07092 API5-208ENST00000531273 1868 ntTSL 2 BASIC20.02■□□□□ 0.8
COL16A1Q07092 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.02■□□□□ 0.8
COL16A1Q07092 ZBED1P1-201ENST00000502364 1930 ntBASIC20.02■□□□□ 0.8
COL16A1Q07092 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL16A1Q07092 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
COL16A1Q07092 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL16A1Q07092 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL16A1Q07092 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC20.02■□□□□ 0.79
COL16A1Q07092 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC20.02■□□□□ 0.79
COL16A1Q07092 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC20.02■□□□□ 0.79
COL16A1Q07092 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC20.02■□□□□ 0.79
COL16A1Q07092 TLE1P1-201ENST00000422965 589 ntBASIC20.02■□□□□ 0.79
COL16A1Q07092 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC20.02■□□□□ 0.79
COL16A1Q07092 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL16A1Q07092 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC20.02■□□□□ 0.79
COL16A1Q07092 AC023906.1-201ENST00000486386 453 ntBASIC20.02■□□□□ 0.79
COL16A1Q07092 RN7SL582P-201ENST00000491078 279 ntBASIC20.02■□□□□ 0.79
COL16A1Q07092 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL16A1Q07092 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
COL16A1Q07092 AL590235.1-201ENST00000564650 861 ntBASIC20.02■□□□□ 0.79
COL16A1Q07092 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC20.02■□□□□ 0.79
COL16A1Q07092 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC20.02■□□□□ 0.79
COL16A1Q07092 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COL16A1Q07092 FAS-202ENST00000352159 1722 ntTSL 5 BASIC20.01■□□□□ 0.79
COL16A1Q07092 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
COL16A1Q07092 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.01■□□□□ 0.79
COL16A1Q07092 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.01■□□□□ 0.79
COL16A1Q07092 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 FLJ38576-201ENST00000623820 2459 ntBASIC20.01■□□□□ 0.79
COL16A1Q07092 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.01■□□□□ 0.79
COL16A1Q07092 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
COL16A1Q07092 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
COL16A1Q07092 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 AL109809.1-201ENST00000418979 1367 ntBASIC20.01■□□□□ 0.79
COL16A1Q07092 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 AC127383.1-201ENST00000444697 1800 ntBASIC20.01■□□□□ 0.79
COL16A1Q07092 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL16A1Q07092 GCOM2-201ENST00000509133 1104 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms