Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CBX1P83916 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CBX1P83916 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CBX1P83916 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBX1P83916 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.13■□□□□ 0.17
CBX1P83916 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBX1P83916 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBX1P83916 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CBX1P83916 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.13■□□□□ 0.17
CBX1P83916 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.13■□□□□ 0.17
CBX1P83916 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBX1P83916 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CBX1P83916 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CBX1P83916 PAM-203ENST00000346918 3302 ntTSL 5 BASIC16.12■□□□□ 0.17
CBX1P83916 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC16.12■□□□□ 0.17
CBX1P83916 AC148477.5-201ENST00000625164 1645 ntBASIC16.12■□□□□ 0.17
CBX1P83916 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CBX1P83916 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.12■□□□□ 0.17
CBX1P83916 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CBX1P83916 AC102953.2-201ENST00000609755 3026 ntBASIC16.12■□□□□ 0.17
CBX1P83916 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC16.12■□□□□ 0.17
CBX1P83916 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CBX1P83916 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CBX1P83916 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.12■□□□□ 0.17
CBX1P83916 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CBX1P83916 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CBX1P83916 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CBX1P83916 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.12■□□□□ 0.17
CBX1P83916 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.12■□□□□ 0.17
CBX1P83916 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.12■□□□□ 0.17
CBX1P83916 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.12■□□□□ 0.17
CBX1P83916 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.12■□□□□ 0.17
CBX1P83916 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
CBX1P83916 AL512604.3-201ENST00000569583 964 ntBASIC16.12■□□□□ 0.17
CBX1P83916 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 MIR4313-201ENST00000580760 101 ntBASIC16.12■□□□□ 0.17
CBX1P83916 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.12■□□□□ 0.17
CBX1P83916 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.12■□□□□ 0.17
CBX1P83916 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.12■□□□□ 0.17
CBX1P83916 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC16.12■□□□□ 0.17
CBX1P83916 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CBX1P83916 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 AC022400.8-201ENST00000623453 3599 ntBASIC16.12■□□□□ 0.17
CBX1P83916 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.12■□□□□ 0.17
CBX1P83916 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC16.12■□□□□ 0.17
CBX1P83916 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CBX1P83916 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC16.12■□□□□ 0.17
CBX1P83916 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC16.12■□□□□ 0.17
CBX1P83916 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CBX1P83916 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC16.11■□□□□ 0.17
CBX1P83916 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX1P83916 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX1P83916 AC111170.3-201ENST00000624282 2464 ntBASIC16.11■□□□□ 0.17
CBX1P83916 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC16.11■□□□□ 0.17
CBX1P83916 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX1P83916 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX1P83916 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.11■□□□□ 0.17
CBX1P83916 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CBX1P83916 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.11■□□□□ 0.17
CBX1P83916 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC16.11■□□□□ 0.17
CBX1P83916 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC16.11■□□□□ 0.17
CBX1P83916 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX1P83916 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX1P83916 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CBX1P83916 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX1P83916 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.11■□□□□ 0.17
CBX1P83916 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CBX1P83916 MIR1238-201ENST00000408483 83 ntBASIC16.11■□□□□ 0.17
CBX1P83916 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.11■□□□□ 0.17
CBX1P83916 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.11■□□□□ 0.17
CBX1P83916 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.11■□□□□ 0.17
CBX1P83916 EGLN1P1-201ENST00000531623 762 ntBASIC16.11■□□□□ 0.17
CBX1P83916 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.11■□□□□ 0.17
CBX1P83916 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CBX1P83916 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CBX1P83916 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.11■□□□□ 0.17
CBX1P83916 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.11■□□□□ 0.17
CBX1P83916 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC16.11■□□□□ 0.17
CBX1P83916 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms