Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SNX16P57768 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX16P57768 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX16P57768 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX16P57768 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX16P57768 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNX16P57768 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX16P57768 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SNX16P57768 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX16P57768 NUS1P3-201ENST00000423502 862 ntBASIC16.29■□□□□ 0.2
SNX16P57768 AC134915.1-201ENST00000426461 574 ntBASIC16.29■□□□□ 0.2
SNX16P57768 AL442647.2-201ENST00000429864 857 ntBASIC16.29■□□□□ 0.2
SNX16P57768 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.29■□□□□ 0.2
SNX16P57768 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX16P57768 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX16P57768 RN7SL204P-201ENST00000582831 262 ntBASIC16.29■□□□□ 0.2
SNX16P57768 AL132655.2-201ENST00000596276 594 ntBASIC16.29■□□□□ 0.2
SNX16P57768 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX16P57768 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX16P57768 AC006058.4-201ENST00000624016 1670 ntBASIC16.29■□□□□ 0.2
SNX16P57768 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX16P57768 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX16P57768 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX16P57768 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SNX16P57768 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX16P57768 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX16P57768 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX16P57768 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX16P57768 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SNX16P57768 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX16P57768 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX16P57768 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SNX16P57768 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX16P57768 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNX16P57768 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX16P57768 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SNX16P57768 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SNX16P57768 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX16P57768 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX16P57768 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX16P57768 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX16P57768 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX16P57768 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX16P57768 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX16P57768 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX16P57768 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX16P57768 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX16P57768 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX16P57768 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX16P57768 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX16P57768 AL645937.2-201ENST00000396808 931 ntBASIC16.28■□□□□ 0.2
SNX16P57768 AC104457.1-201ENST00000401024 814 ntBASIC16.28■□□□□ 0.2
SNX16P57768 AC002472.2-201ENST00000442739 958 ntBASIC16.28■□□□□ 0.2
SNX16P57768 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.28■□□□□ 0.2
SNX16P57768 AC026410.3-201ENST00000514280 936 ntBASIC16.28■□□□□ 0.2
SNX16P57768 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX16P57768 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.28■□□□□ 0.2
SNX16P57768 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.28■□□□□ 0.2
SNX16P57768 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX16P57768 BRI3BPP1-201ENST00000594224 787 ntBASIC16.28■□□□□ 0.2
SNX16P57768 AC092364.2-202ENST00000597012 1073 ntBASIC16.28■□□□□ 0.2
SNX16P57768 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX16P57768 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX16P57768 MROH4P-201ENST00000431302 1578 ntBASIC16.28■□□□□ 0.2
SNX16P57768 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SNX16P57768 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SNX16P57768 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SNX16P57768 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX16P57768 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX16P57768 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SNX16P57768 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX16P57768 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
SNX16P57768 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX16P57768 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SNX16P57768 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX16P57768 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SNX16P57768 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX16P57768 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX16P57768 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
SNX16P57768 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SNX16P57768 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX16P57768 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX16P57768 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX16P57768 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.27■□□□□ 0.2
SNX16P57768 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SNX16P57768 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX16P57768 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.27■□□□□ 0.2
SNX16P57768 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SNX16P57768 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX16P57768 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.27■□□□□ 0.2
SNX16P57768 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.27■□□□□ 0.2
SNX16P57768 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.27■□□□□ 0.2
SNX16P57768 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
SNX16P57768 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.27■□□□□ 0.2
SNX16P57768 AC236430.1-201ENST00000402231 743 ntBASIC16.27■□□□□ 0.2
SNX16P57768 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.27■□□□□ 0.2
SNX16P57768 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.27■□□□□ 0.2
SNX16P57768 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.27■□□□□ 0.2
SNX16P57768 AC123567.1-201ENST00000548294 1261 ntBASIC16.27■□□□□ 0.2
SNX16P57768 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms