Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF140P52738 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF140P52738 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF140P52738 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF140P52738 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 LILRP1-201ENST00000444199 1370 ntBASIC15.3■□□□□ 0.04
ZNF140P52738 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF140P52738 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF140P52738 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 TP53TG3HP-202ENST00000569755 579 ntBASIC15.3■□□□□ 0.04
ZNF140P52738 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF140P52738 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ZNF140P52738 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF140P52738 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ZNF140P52738 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF140P52738 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF140P52738 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF140P52738 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF140P52738 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
ZNF140P52738 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF140P52738 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ZNF140P52738 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF140P52738 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.29■□□□□ 0.04
ZNF140P52738 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.29■□□□□ 0.04
ZNF140P52738 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF140P52738 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.29■□□□□ 0.04
ZNF140P52738 AC092364.2-202ENST00000597012 1073 ntBASIC15.29■□□□□ 0.04
ZNF140P52738 AC133539.2-201ENST00000604757 467 ntBASIC15.29■□□□□ 0.04
ZNF140P52738 WFDC1-204ENST00000613603 549 ntBASIC15.29■□□□□ 0.04
ZNF140P52738 BX539320.1-201ENST00000623759 877 ntBASIC15.29■□□□□ 0.04
ZNF140P52738 PRSS30P-206ENST00000641773 873 ntBASIC15.29■□□□□ 0.04
ZNF140P52738 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF140P52738 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.29■□□□□ 0.04
ZNF140P52738 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
ZNF140P52738 CICP24-201ENST00000605464 2705 ntBASIC15.29■□□□□ 0.04
ZNF140P52738 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ZNF140P52738 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF140P52738 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 AC013726.1-201ENST00000563747 2285 ntBASIC15.28■□□□□ 0.04
ZNF140P52738 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ZNF140P52738 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF140P52738 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
ZNF140P52738 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
ZNF140P52738 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF140P52738 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.28■□□□□ 0.04
ZNF140P52738 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.28■□□□□ 0.04
ZNF140P52738 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.28■□□□□ 0.04
ZNF140P52738 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ZNF140P52738 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.28■□□□□ 0.04
ZNF140P52738 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.28■□□□□ 0.04
ZNF140P52738 AC005252.2-201ENST00000624630 1141 ntBASIC15.28■□□□□ 0.04
ZNF140P52738 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.28■□□□□ 0.04
ZNF140P52738 LINC01101-201ENST00000622953 1884 ntBASIC15.28■□□□□ 0.04
ZNF140P52738 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZNF140P52738 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ZNF140P52738 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms