Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.02■□□□□ -0
KRT6CP48668 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
KRT6CP48668 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.02■□□□□ -0
KRT6CP48668 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.02■□□□□ -0
KRT6CP48668 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
KRT6CP48668 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KRT6CP48668 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KRT6CP48668 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.02■□□□□ -0
KRT6CP48668 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KRT6CP48668 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.02■□□□□ -0
KRT6CP48668 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.02■□□□□ -0
KRT6CP48668 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.02■□□□□ -0
KRT6CP48668 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
KRT6CP48668 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.02■□□□□ -0
KRT6CP48668 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
KRT6CP48668 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
KRT6CP48668 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.02■□□□□ -0
KRT6CP48668 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
KRT6CP48668 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.02■□□□□ -0
KRT6CP48668 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.02■□□□□ -0
KRT6CP48668 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
KRT6CP48668 AC013726.1-201ENST00000563747 2285 ntBASIC15.02□□□□□ -0.01
KRT6CP48668 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
KRT6CP48668 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT6CP48668 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT6CP48668 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT6CP48668 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT6CP48668 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT6CP48668 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
KRT6CP48668 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT6CP48668 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
KRT6CP48668 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.02□□□□□ -0.01
KRT6CP48668 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
KRT6CP48668 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.02□□□□□ -0.01
KRT6CP48668 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KRT6CP48668 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.01□□□□□ -0.01
KRT6CP48668 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.01□□□□□ -0.01
KRT6CP48668 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
KRT6CP48668 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
KRT6CP48668 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
KRT6CP48668 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.01□□□□□ -0.01
KRT6CP48668 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
KRT6CP48668 AC015922.1-201ENST00000421102 1152 ntBASIC15.01□□□□□ -0.01
KRT6CP48668 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.01□□□□□ -0.01
KRT6CP48668 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.01□□□□□ -0.01
KRT6CP48668 RN7SL618P-201ENST00000477850 296 ntBASIC15.01□□□□□ -0.01
KRT6CP48668 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.01□□□□□ -0.01
KRT6CP48668 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.01□□□□□ -0.01
KRT6CP48668 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.01□□□□□ -0.01
KRT6CP48668 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.01□□□□□ -0.01
KRT6CP48668 AC079781.4-201ENST00000641908 219 ntBASIC15.01□□□□□ -0.01
KRT6CP48668 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 AL137784.3-201ENST00000623858 2288 ntBASIC15.01□□□□□ -0.01
KRT6CP48668 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
KRT6CP48668 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
KRT6CP48668 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.01□□□□□ -0.01
KRT6CP48668 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
KRT6CP48668 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
KRT6CP48668 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15□□□□□ -0.01
KRT6CP48668 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
KRT6CP48668 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
KRT6CP48668 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
KRT6CP48668 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15□□□□□ -0.01
KRT6CP48668 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
KRT6CP48668 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
KRT6CP48668 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KRT6CP48668 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
KRT6CP48668 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms