Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NEDD4P46934 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.08■□□□□ 0.48
NEDD4P46934 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NEDD4P46934 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.07■□□□□ 0.48
NEDD4P46934 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.07■□□□□ 0.48
NEDD4P46934 AL360270.3-201ENST00000609118 1348 ntBASIC18.07■□□□□ 0.48
NEDD4P46934 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.07■□□□□ 0.48
NEDD4P46934 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NEDD4P46934 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
NEDD4P46934 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.07■□□□□ 0.48
NEDD4P46934 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 AL139094.1-201ENST00000405549 1188 ntBASIC18.07■□□□□ 0.48
NEDD4P46934 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NEDD4P46934 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.07■□□□□ 0.48
NEDD4P46934 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.07■□□□□ 0.48
NEDD4P46934 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.07■□□□□ 0.48
NEDD4P46934 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 PTP4A1P2-201ENST00000546033 454 ntBASIC18.07■□□□□ 0.48
NEDD4P46934 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.07■□□□□ 0.48
NEDD4P46934 AC009486.1-201ENST00000569860 813 ntBASIC18.07■□□□□ 0.48
NEDD4P46934 GNRHR2-203ENST00000581100 1187 ntBASIC18.07■□□□□ 0.48
NEDD4P46934 AC015936.2-201ENST00000593177 259 ntBASIC18.07■□□□□ 0.48
NEDD4P46934 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.07■□□□□ 0.48
NEDD4P46934 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.07■□□□□ 0.48
NEDD4P46934 AP005019.2-201ENST00000615104 511 ntBASIC18.07■□□□□ 0.48
NEDD4P46934 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.07■□□□□ 0.48
NEDD4P46934 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NEDD4P46934 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.07■□□□□ 0.48
NEDD4P46934 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NEDD4P46934 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 LINC00528-201ENST00000600723 2160 ntBASIC18.07■□□□□ 0.48
NEDD4P46934 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.07■□□□□ 0.48
NEDD4P46934 AC012508.2-201ENST00000567613 1472 ntBASIC18.07■□□□□ 0.48
NEDD4P46934 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
NEDD4P46934 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEDD4P46934 AC134312.5-201ENST00000568031 1313 ntBASIC18.07■□□□□ 0.48
NEDD4P46934 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.07■□□□□ 0.48
NEDD4P46934 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
NEDD4P46934 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NEDD4P46934 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NEDD4P46934 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
NEDD4P46934 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 BAATP1-201ENST00000412284 1225 ntBASIC18.06■□□□□ 0.48
NEDD4P46934 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.06■□□□□ 0.48
NEDD4P46934 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.06■□□□□ 0.48
NEDD4P46934 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.06■□□□□ 0.48
NEDD4P46934 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.06■□□□□ 0.48
NEDD4P46934 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.06■□□□□ 0.48
NEDD4P46934 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.06■□□□□ 0.48
NEDD4P46934 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.06■□□□□ 0.48
NEDD4P46934 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NEDD4P46934 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.06■□□□□ 0.48
NEDD4P46934 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.06■□□□□ 0.48
NEDD4P46934 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NEDD4P46934 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NEDD4P46934 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.06■□□□□ 0.48
NEDD4P46934 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.06■□□□□ 0.48
NEDD4P46934 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD4P46934 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NEDD4P46934 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD4P46934 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD4P46934 KRT8P14-201ENST00000414254 1442 ntBASIC18.05■□□□□ 0.48
NEDD4P46934 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NEDD4P46934 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD4P46934 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD4P46934 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD4P46934 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms