Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.29■□□□□ 0.2
RFC1P35251 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFC1P35251 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC1P35251 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.29■□□□□ 0.2
RFC1P35251 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC1P35251 UGT1A2P-201ENST00000454886 866 ntBASIC16.29■□□□□ 0.2
RFC1P35251 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.29■□□□□ 0.2
RFC1P35251 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.29■□□□□ 0.2
RFC1P35251 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.29■□□□□ 0.2
RFC1P35251 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.29■□□□□ 0.2
RFC1P35251 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.29■□□□□ 0.2
RFC1P35251 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RFC1P35251 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC1P35251 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC1P35251 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFC1P35251 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC1P35251 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RFC1P35251 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RFC1P35251 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFC1P35251 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFC1P35251 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.29■□□□□ 0.2
RFC1P35251 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.29■□□□□ 0.2
RFC1P35251 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFC1P35251 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFC1P35251 AC023824.1-201ENST00000562945 2975 ntBASIC16.29■□□□□ 0.2
RFC1P35251 CLK3P2-201ENST00000427566 1453 ntBASIC16.29■□□□□ 0.2
RFC1P35251 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RFC1P35251 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RFC1P35251 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.28■□□□□ 0.2
RFC1P35251 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RFC1P35251 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RFC1P35251 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
RFC1P35251 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.28■□□□□ 0.2
RFC1P35251 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RFC1P35251 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RFC1P35251 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
RFC1P35251 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.28■□□□□ 0.2
RFC1P35251 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.28■□□□□ 0.2
RFC1P35251 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.28■□□□□ 0.2
RFC1P35251 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.28■□□□□ 0.2
RFC1P35251 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.28■□□□□ 0.2
RFC1P35251 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.28■□□□□ 0.2
RFC1P35251 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RFC1P35251 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 MROH4P-201ENST00000431302 1578 ntBASIC16.28■□□□□ 0.2
RFC1P35251 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RFC1P35251 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.28■□□□□ 0.2
RFC1P35251 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.28■□□□□ 0.2
RFC1P35251 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFC1P35251 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.28■□□□□ 0.2
RFC1P35251 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RFC1P35251 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFC1P35251 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFC1P35251 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.27■□□□□ 0.2
RFC1P35251 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.27■□□□□ 0.2
RFC1P35251 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFC1P35251 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.27■□□□□ 0.2
RFC1P35251 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RFC1P35251 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFC1P35251 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.27■□□□□ 0.2
RFC1P35251 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFC1P35251 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC1P35251 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC1P35251 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.27■□□□□ 0.2
RFC1P35251 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFC1P35251 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.27■□□□□ 0.2
RFC1P35251 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC1P35251 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC1P35251 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC1P35251 RNA5SP421-201ENST00000516864 134 ntBASIC16.27■□□□□ 0.2
RFC1P35251 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC1P35251 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC1P35251 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.27■□□□□ 0.2
RFC1P35251 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC1P35251 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFC1P35251 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFC1P35251 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.27■□□□□ 0.2
RFC1P35251 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.27■□□□□ 0.2
RFC1P35251 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFC1P35251 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC1P35251 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFC1P35251 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RFC1P35251 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.27■□□□□ 0.2
RFC1P35251 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC1P35251 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC1P35251 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.27■□□□□ 0.19
RFC1P35251 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.27■□□□□ 0.19
RFC1P35251 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms