Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ABCD3P28288 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.21□□□□□ -0.13
ABCD3P28288 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.21□□□□□ -0.13
ABCD3P28288 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.21□□□□□ -0.13
ABCD3P28288 COX5BP8-201ENST00000416911 349 ntBASIC14.21□□□□□ -0.13
ABCD3P28288 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.21□□□□□ -0.13
ABCD3P28288 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.21□□□□□ -0.13
ABCD3P28288 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.21□□□□□ -0.13
ABCD3P28288 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ABCD3P28288 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.21□□□□□ -0.13
ABCD3P28288 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.21□□□□□ -0.13
ABCD3P28288 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.21□□□□□ -0.13
ABCD3P28288 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.21□□□□□ -0.13
ABCD3P28288 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ABCD3P28288 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ABCD3P28288 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ABCD3P28288 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
ABCD3P28288 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ABCD3P28288 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ABCD3P28288 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ABCD3P28288 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ABCD3P28288 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ABCD3P28288 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
ABCD3P28288 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ABCD3P28288 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.21□□□□□ -0.14
ABCD3P28288 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ABCD3P28288 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ABCD3P28288 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ABCD3P28288 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.21□□□□□ -0.14
ABCD3P28288 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
ABCD3P28288 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.2□□□□□ -0.14
ABCD3P28288 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.2□□□□□ -0.14
ABCD3P28288 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.2□□□□□ -0.14
ABCD3P28288 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ABCD3P28288 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.2□□□□□ -0.14
ABCD3P28288 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.2□□□□□ -0.14
ABCD3P28288 AC023024.2-201ENST00000623561 1993 ntBASIC14.2□□□□□ -0.14
ABCD3P28288 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 AL109954.1-202ENST00000564051 2148 ntBASIC14.2□□□□□ -0.14
ABCD3P28288 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ABCD3P28288 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ABCD3P28288 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ABCD3P28288 NME2P1-201ENST00000426182 414 ntBASIC14.2□□□□□ -0.14
ABCD3P28288 GHSR-202ENST00000427970 912 ntBASIC14.2□□□□□ -0.14
ABCD3P28288 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.2□□□□□ -0.14
ABCD3P28288 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.2□□□□□ -0.14
ABCD3P28288 INE1-201ENST00000456273 945 ntBASIC14.2□□□□□ -0.14
ABCD3P28288 AC004066.1-201ENST00000502488 802 ntBASIC14.2□□□□□ -0.14
ABCD3P28288 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.2□□□□□ -0.14
ABCD3P28288 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.2□□□□□ -0.14
ABCD3P28288 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.2□□□□□ -0.14
ABCD3P28288 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.2□□□□□ -0.14
ABCD3P28288 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.2□□□□□ -0.14
ABCD3P28288 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.2□□□□□ -0.14
ABCD3P28288 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.2□□□□□ -0.14
ABCD3P28288 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ABCD3P28288 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.2□□□□□ -0.14
ABCD3P28288 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ABCD3P28288 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ABCD3P28288 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ABCD3P28288 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.2□□□□□ -0.14
ABCD3P28288 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ABCD3P28288 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.2□□□□□ -0.14
ABCD3P28288 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.19□□□□□ -0.14
ABCD3P28288 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.19□□□□□ -0.14
ABCD3P28288 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ABCD3P28288 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
ABCD3P28288 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms