Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC3P19447 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.87■□□□□ 0.45
ERCC3P19447 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC3P19447 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.87■□□□□ 0.45
ERCC3P19447 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 GAPDHP40-201ENST00000505218 1006 ntBASIC17.87■□□□□ 0.45
ERCC3P19447 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.87■□□□□ 0.45
ERCC3P19447 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.87■□□□□ 0.45
ERCC3P19447 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.87■□□□□ 0.45
ERCC3P19447 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ERCC3P19447 AC105917.1-201ENST00000506637 2539 ntBASIC17.87■□□□□ 0.45
ERCC3P19447 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ERCC3P19447 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.86■□□□□ 0.45
ERCC3P19447 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.86■□□□□ 0.45
ERCC3P19447 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ERCC3P19447 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ERCC3P19447 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.86■□□□□ 0.45
ERCC3P19447 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.86■□□□□ 0.45
ERCC3P19447 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.86■□□□□ 0.45
ERCC3P19447 BCYRN1-201ENST00000418539 200 ntBASIC17.86■□□□□ 0.45
ERCC3P19447 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.86■□□□□ 0.45
ERCC3P19447 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
ERCC3P19447 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.86■□□□□ 0.45
ERCC3P19447 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.86■□□□□ 0.45
ERCC3P19447 AC103810.3-201ENST00000583567 96 ntBASIC17.86■□□□□ 0.45
ERCC3P19447 AP005019.2-201ENST00000615104 511 ntBASIC17.86■□□□□ 0.45
ERCC3P19447 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.86■□□□□ 0.45
ERCC3P19447 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.86■□□□□ 0.45
ERCC3P19447 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ERCC3P19447 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.86■□□□□ 0.45
ERCC3P19447 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.86■□□□□ 0.45
ERCC3P19447 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ERCC3P19447 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.86■□□□□ 0.45
ERCC3P19447 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ERCC3P19447 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.86■□□□□ 0.45
ERCC3P19447 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ERCC3P19447 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.85■□□□□ 0.45
ERCC3P19447 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.85■□□□□ 0.45
ERCC3P19447 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.85■□□□□ 0.45
ERCC3P19447 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
ERCC3P19447 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.85■□□□□ 0.45
ERCC3P19447 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.85■□□□□ 0.45
ERCC3P19447 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.85■□□□□ 0.45
ERCC3P19447 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.85■□□□□ 0.45
ERCC3P19447 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.85■□□□□ 0.45
ERCC3P19447 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ERCC3P19447 MIR4313-201ENST00000580760 101 ntBASIC17.85■□□□□ 0.45
ERCC3P19447 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.85■□□□□ 0.45
ERCC3P19447 AC243960.2-201ENST00000600996 747 ntBASIC17.85■□□□□ 0.45
ERCC3P19447 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 AC091271.1-201ENST00000611877 1162 ntBASIC17.85■□□□□ 0.45
ERCC3P19447 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.85■□□□□ 0.45
ERCC3P19447 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.85■□□□□ 0.45
ERCC3P19447 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.85■□□□□ 0.45
ERCC3P19447 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.85■□□□□ 0.45
ERCC3P19447 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ERCC3P19447 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ERCC3P19447 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
ERCC3P19447 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ERCC3P19447 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms