Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
POLR3DP05423 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
POLR3DP05423 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
POLR3DP05423 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.43■□□□□ 0.54
POLR3DP05423 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.43■□□□□ 0.54
POLR3DP05423 PDIA3P1-201ENST00000471856 1510 ntBASIC18.43■□□□□ 0.54
POLR3DP05423 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
POLR3DP05423 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.43■□□□□ 0.54
POLR3DP05423 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
POLR3DP05423 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
POLR3DP05423 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.43■□□□□ 0.54
POLR3DP05423 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
POLR3DP05423 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
POLR3DP05423 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
POLR3DP05423 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
POLR3DP05423 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.42■□□□□ 0.54
POLR3DP05423 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.42■□□□□ 0.54
POLR3DP05423 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
POLR3DP05423 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
POLR3DP05423 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.42■□□□□ 0.54
POLR3DP05423 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.42■□□□□ 0.54
POLR3DP05423 KRT223P-202ENST00000449164 1292 ntBASIC18.42■□□□□ 0.54
POLR3DP05423 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.42■□□□□ 0.54
POLR3DP05423 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.42■□□□□ 0.54
POLR3DP05423 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.42■□□□□ 0.54
POLR3DP05423 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
POLR3DP05423 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.42■□□□□ 0.54
POLR3DP05423 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.42■□□□□ 0.54
POLR3DP05423 COX11-210ENST00000639671 696 ntBASIC18.42■□□□□ 0.54
POLR3DP05423 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.42■□□□□ 0.54
POLR3DP05423 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
POLR3DP05423 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
POLR3DP05423 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR3DP05423 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR3DP05423 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR3DP05423 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR3DP05423 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
POLR3DP05423 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR3DP05423 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 ANKRD19P-201ENST00000338192 862 ntBASIC18.41■□□□□ 0.54
POLR3DP05423 ACKR1-201ENST00000368121 1240 ntBASIC18.41■□□□□ 0.54
POLR3DP05423 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR3DP05423 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
POLR3DP05423 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.41■□□□□ 0.54
POLR3DP05423 RPS2P32-201ENST00000439199 892 ntBASIC18.41■□□□□ 0.54
POLR3DP05423 CTBP2P5-201ENST00000454986 1264 ntBASIC18.41■□□□□ 0.54
POLR3DP05423 AC119751.2-201ENST00000504529 210 ntBASIC18.41■□□□□ 0.54
POLR3DP05423 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR3DP05423 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.41■□□□□ 0.54
POLR3DP05423 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.41■□□□□ 0.54
POLR3DP05423 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.41■□□□□ 0.54
POLR3DP05423 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
POLR3DP05423 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.41■□□□□ 0.54
POLR3DP05423 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.41■□□□□ 0.54
POLR3DP05423 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 AC020658.6-201ENST00000623564 1870 ntBASIC18.41■□□□□ 0.54
POLR3DP05423 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
POLR3DP05423 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.41■□□□□ 0.54
POLR3DP05423 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
POLR3DP05423 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
POLR3DP05423 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR3DP05423 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
POLR3DP05423 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
POLR3DP05423 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR3DP05423 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR3DP05423 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR3DP05423 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.4■□□□□ 0.54
POLR3DP05423 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
POLR3DP05423 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms