Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 REXO1L2P-201ENST00000425429 2069 ntBASIC16.55■□□□□ 0.24
HLA-DRAP01903 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 AC006058.4-201ENST00000624016 1670 ntBASIC16.54■□□□□ 0.24
HLA-DRAP01903 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 AC025048.6-201ENST00000634326 1161 ntBASIC16.54■□□□□ 0.24
HLA-DRAP01903 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 ZBED1P1-201ENST00000502364 1930 ntBASIC16.54■□□□□ 0.24
HLA-DRAP01903 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 LINC00528-201ENST00000600723 2160 ntBASIC16.54■□□□□ 0.24
HLA-DRAP01903 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DRAP01903 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-DRAP01903 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 AP001582.1-201ENST00000525856 295 ntBASIC16.53■□□□□ 0.24
HLA-DRAP01903 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DRAP01903 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DRAP01903 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms