Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 AC025048.6-201ENST00000634326 1161 ntBASIC11.93□□□□□ -0.5
TRBV12-3P01733 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.93□□□□□ -0.5
TRBV12-3P01733 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 AL513477.1-201ENST00000602865 2407 ntBASIC11.93□□□□□ -0.5
TRBV12-3P01733 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TRBV12-3P01733 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
TRBV12-3P01733 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC11.93□□□□□ -0.5
TRBV12-3P01733 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRBV12-3P01733 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 AC134915.1-201ENST00000426461 574 ntBASIC11.92□□□□□ -0.5
TRBV12-3P01733 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 GAPDHP40-201ENST00000505218 1006 ntBASIC11.92□□□□□ -0.5
TRBV12-3P01733 AC026410.3-201ENST00000514280 936 ntBASIC11.92□□□□□ -0.5
TRBV12-3P01733 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 AC120045.2-201ENST00000567334 178 ntBASIC11.92□□□□□ -0.5
TRBV12-3P01733 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 TMEM261P1-201ENST00000604899 340 ntBASIC11.92□□□□□ -0.5
TRBV12-3P01733 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TRBV12-3P01733 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRBV12-3P01733 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 AC126365.1-201ENST00000578585 1514 ntBASIC11.91□□□□□ -0.5
TRBV12-3P01733 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.91□□□□□ -0.5
TRBV12-3P01733 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TRBV12-3P01733 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.91□□□□□ -0.5
TRBV12-3P01733 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.91□□□□□ -0.5
TRBV12-3P01733 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TRBV12-3P01733 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TRBV12-3P01733 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 C1QBPP1-201ENST00000400117 770 ntBASIC11.91□□□□□ -0.5
TRBV12-3P01733 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.91□□□□□ -0.5
TRBV12-3P01733 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRBV12-3P01733 AL442647.2-201ENST00000429864 857 ntBASIC11.91□□□□□ -0.5
TRBV12-3P01733 RN7SL692P-201ENST00000464677 288 ntBASIC11.91□□□□□ -0.5
TRBV12-3P01733 RPL13AP25-201ENST00000484130 612 ntBASIC11.91□□□□□ -0.5
TRBV12-3P01733 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.91□□□□□ -0.5
TRBV12-3P01733 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.91□□□□□ -0.5
TRBV12-3P01733 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.91□□□□□ -0.5
TRBV12-3P01733 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms